Affinage · Plasmodium

NUP205

PF3D7_1364200 · nucleoporin NUP205, putative

Annotated
2026-09-08
4 papers in source corpus 3 papers cited in narrative 3 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_1364200 (NUP205) encodes a nucleoporin of the Plasmodium nuclear pore complex (NPC), localizing to the nuclear periphery throughout the parasite life cycle in the P. berghei ortholog (PMID:30050042). Proximity labeling establishes NUP205 as a physical constituent of the NPC and a proximal interactor of the nucleoporin NUP313, being biotinylated and recovered by mass spectrometry from a NUP313::TurboID strain (PMID:36040030). Its peripheral nuclear distribution is maintained at the late trophozoite stage, where it serves as a nuclear-periphery marker alongside NAB2 (PMID:34604117). Beyond its membership in the NPC and its proximity to NUP313, no enzymatic activity, direct nucleocytoplasmic transport role, or loss-of-function phenotype has been characterized for NUP205 itself in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2018 Medium

    Establishing whether NUP205 is a genuine nuclear pore component was the first question; bioinformatic prediction plus fluorescent tagging placed it at the nuclear periphery across the life cycle, defining it as a bona fide nucleoporin rather than a predicted homolog only.

    Evidence Bioinformatic identification with fluorescent protein tagging and life-cycle localization imaging in P. berghei

    PMID:30050042

    Open questions at the time
    • No functional assay or loss-of-function phenotype for NUP205
    • No demonstration of a direct transport or scaffolding role
    • Assignment based on the P. berghei ortholog, not the P. falciparum gene directly
  2. 2021 Medium

    Whether NUP205 retains its peripheral localization in specific asexual stages was addressed by GFP tagging, confirming nuclear-periphery residence at the late trophozoite stage and validating its use as a positional marker for co-localization.

    Evidence Live-cell fluorescence imaging of endogenously GFP-tagged NUP205 co-expressed with NAB2::mCherry in P. berghei ANKA

    PMID:34604117

    Open questions at the time
    • Localization does not establish molecular function
    • No evidence of dynamic behavior or stage-specific regulation of NUP205
  3. 2022 Medium

    The question of NUP205's physical context within the NPC was answered by proximity labeling, which placed it in close spatial proximity to NUP313, providing orthogonal biochemical confirmation of NPC membership beyond imaging.

    Evidence TurboID proximity labeling with affinity purification and mass spectrometry, anti-HA immunofluorescence, and streptavidin staining in P. berghei

    PMID:36040030

    Open questions at the time
    • Proximity does not establish a direct binary interaction or complex architecture
    • No stoichiometry or assembly ordering within the NPC defined
    • No functional consequence of the NUP205–NUP313 association tested

Open questions

Synthesis pass · forward-looking unresolved questions
  • The molecular function of NUP205 — whether it acts as a structural scaffold, a transport-competent FG-nucleoporin, or has a regulatory role — and any loss-of-function phenotype remain undefined in the corpus.
  • No gene disruption or conditional knockdown of NUP205 reported
  • No enzymatic or transport activity assigned
  • No structural model of NUP205 within the Plasmodium NPC
  • All evidence derives from the P. berghei ortholog rather than PF3D7_1364200 directly

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
Nuclear pore complex (NPC)

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2018 NUP205 (PF3D7_1364200 ortholog in P. berghei) was identified as a nucleoporin component of the nuclear pore complex and localized to the nuclear periphery throughout the P. berghei life cycle, using bioinformatic identification combined with fluorescent protein tagging. Bioinformatic identification combined with fluorescent protein tagging and localization imaging throughout the parasite life cycle Scientific reports Medium 30050042
2022 NUP205 (P. berghei ortholog) was confirmed as a component of the nuclear pore complex by TurboID proximity labeling: Nup205::TurboID-HA fusion protein localized to the nuclear periphery by anti-HA immunofluorescence and streptavidin staining, and was identified in mass spectrometric analysis of affinity-purified biotinylated proteins from a Nup313::TurboID strain, establishing NUP205 as a proximal interactor of NUP313 within the NPC. TurboID proximity labeling with affinity purification and mass spectrometry; anti-HA immunofluorescence; streptavidin staining mBio Medium 36040030
2021 NUP205 (P. berghei ortholog PBANKA_1140100) localizes to the nuclear periphery in the late trophozoite stage, as determined by live-cell fluorescence imaging of a GFP-tagged NUP205 fusion protein co-expressed with NAB2::mCherry, which itself localizes to the nuclear periphery. Live-cell fluorescence imaging of endogenously GFP-tagged NUP205 in transgenic P. berghei Frontiers in cellular and infection microbiology Medium 34604117

Source papers

Stage 0 corpus · 4 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2018 Nuclear Pore Complex Components in the Malaria Parasite Plasmodium berghei. Scientific reports 20 30050042
2026 A heterologous marker-free selection approach for CRISPR/Cas9-based gene editing in the malaria parasite Plasmodium falciparum. mSphere 0 41885428
2022 TurboID Identification of Evolutionarily Divergent Components of the Nuclear Pore Complex in the Malaria Model Plasmodium berghei. mBio 0 36040030
2021 Roles and Cellular Localization of GBP2 and NAB2 During the Blood Stage of Malaria Parasites. Frontiers in cellular and infection microbiology 0 34604117