Affinage · Plasmodium

RPL34

PF3D7_0710600 · 60S ribosomal protein L34

Annotated
2026-09-08
5 papers in source corpus 3 papers cited in narrative 3 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_0710600 (RPL34) is a structural component of the 60S large subunit of the Plasmodium falciparum cytoplasmic 80S ribosome, placed within the assembled particle by high-resolution cryo-EM of the intact 80S ribosome (PMID:24913268). Its membership in the actively translating 60S subunit has been confirmed in blood-stage schizonts by cryo-EM with atomic model building (PMID:26432834) and directly in the native cellular context by in situ cryo-electron tomography of ribosomes translating inside infected erythrocytes (PMID:40825879). Beyond this structural role within the 60S subunit, no enzymatic activity, binding partner, or post-translational modification of RPL34 itself has been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2014 Medium

    Establishing the atomic architecture of the P. falciparum 80S ribosome answered where RPL34 physically resides, placing it as a defined structural element of the 60S large subunit.

    Evidence Cryo-EM structure of the intact P. falciparum 80S ribosome at 3.2 Å resolution

    PMID:24913268

    Open questions at the time
    • No functional experiment targets RPL34 specifically; its role is inferred from whole-ribosome membership
    • No binding partner or post-translational modification of RPL34 identified
    • Contribution of RPL34 to subunit assembly or translation not addressed
  2. 2015 Medium

    Reconstructions from actively translating schizont-stage ribosomes confirmed RPL34's structural incorporation into the 60S subunit during translation rather than in an isolated or artifactual state.

    Evidence Cryo-EM reconstruction and flexible atomic model building from P. falciparum schizont ribosomes

    PMID:26432834

    Open questions at the time
    • RPL34 position inferred from the whole-ribosome model, not from RPL34-specific analysis
    • No perturbation of RPL34 to test its functional requirement
    • Stage-specific expression or dynamics of RPL34 not resolved
  3. 2025 Medium

    In situ structures of ribosomes caught translating inside infected erythrocytes established that RPL34 occupies the 60S subunit in the physiological cellular environment during elongation, extending the in vitro picture to native conditions.

    Evidence In situ cryo-electron tomography of native P. falciparum 80S ribosomes inside infected human erythrocytes, yielding eight translating-state structures

    PMID:40825879

    Open questions at the time
    • No functional characterization of RPL34 itself beyond structural presence
    • Whether RPL34 conformation changes across the eight translating states is not attributed to RPL34 specifically
    • No interaction partners or modifications of RPL34 mapped

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether RPL34 has any role beyond being a passive structural constituent of the 60S subunit — including specific rRNA/protein contacts, assembly dependencies, or druggable features distinct from other ribosomal proteins — remains unaddressed.
  • No genetic knockout or knockdown of RPL34 reported
  • No binding partner, substrate, or post-translational modification identified
  • No RPL34-specific functional or essentiality data

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
60S large ribosomal subunit of the cytoplasmic 80S ribosome

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2014 Cryo-EM structure of the P. falciparum 80S ribosome at 3.2 Å resolution was determined, establishing the structural context in which RPL34 (PF3D7_0710600) resides as a component of the 60S large subunit of the cytoplasmic ribosome. Cryo-EM structure determination at 3.2 Å resolution eLife Medium 24913268
2015 Multiple cryo-EM reconstructions of the P. falciparum 80S ribosome at sub-nanometer resolution were obtained from blood-stage schizonts, and atomic models were built by flexible fitting, further confirming RPL34 (PF3D7_0710600) as a structural component of the 60S large subunit during active translation. Cryo-EM reconstruction and atomic model building from P. falciparum schizont-stage ribosomes Nucleic acids research Medium 26432834
2025 Eight high-resolution structures of the native P. falciparum 80S ribosome in actively translating states were determined by in situ cryo-electron tomography inside infected erythrocytes, further establishing RPL34 (PF3D7_0710600) as a structural component of the 60S large subunit in the physiological cellular context during translation elongation. In situ cryo-electron tomography inside P. falciparum-infected human erythrocytes Nature structural & molecular biology Medium 40825879

Source papers

Stage 0 corpus · 5 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine. eLife 276 24913268
2017 Mefloquine targets the Plasmodium falciparum 80S ribosome to inhibit protein synthesis. Nature microbiology 138 28288098
2015 Dynamical features of the Plasmodium falciparum ribosome during translation. Nucleic acids research 46 26432834
2025 Integrated structural biology of the native malarial translation machinery and its inhibition by an antimalarial drug. Nature structural & molecular biology 10 40825879
2025 Antimalarial drug artemisinin stabilizes PfRACK1 binding to the ribosome. Structure (London, England : 1993) 4 40480224