Affinage · Plasmodium

RPS30

PF3D7_0219200 · 40S ribosomal protein S30

Annotated
2026-09-07
5 papers in source corpus 3 papers cited in narrative 3 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_0219200 (RPS30) is a constituent protein of the small (40S) subunit of the P. falciparum 80S ribosome, its structural context within the assembled ribosome having been resolved by high-resolution cryo-EM of ribosomes purified from blood-stage schizonts (PMID:24913268, PMID:26432834). These structures place RPS30 within a 40S subunit whose features distinguish the parasite ribosome from its mammalian counterpart, and captured the ribosome bound to the translation inhibitor emetine at the small-subunit E-site (PMID:24913268, PMID:26432834). Independently, the RPS30 promoter drives strong, constitutive expression across the complete parasite life cycle including liver stages, identifying it as a housekeeping gene (PMID:32587831). Beyond its membership in the 40S subunit and its constitutive promoter activity, no experiment in the available corpus has defined a specific molecular function or binding interaction for RPS30 itself.

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2014 Medium

    To understand how antimalarial translation inhibitors act on the parasite ribosome, the first high-resolution structure was needed, which placed RPS30 within the structural context of the 40S subunit.

    Evidence Cryo-EM of the P. falciparum 80S ribosome-emetine complex at 3.2 Å, with emetine at the small-subunit E-site

    PMID:24913268

    Open questions at the time
    • No functional experiment targeted RPS30 individually; its role is inferred solely from 40S subunit membership
    • No RPS30-specific binding partners or contacts within the subunit were dissected
    • Does not establish any function outside the ribosome
  2. 2015 Medium

    To define features that distinguish the parasite ribosome from the mammalian one for drug-targeting purposes, cryo-EM reconstructions from schizonts provided atomic models of the subunits containing RPS30.

    Evidence Cryo-EM with five reconstructions of ribosomes purified from P. falciparum schizonts and atomic model building by flexible fitting

    PMID:26432834

    Open questions at the time
    • RPS30 was not experimentally probed as an individual protein
    • No RPS30-specific functional or interaction data emerged
    • Structural role of RPS30 within the 40S subunit not functionally tested
  3. 2020 Medium

    To determine whether RPS30 is expressed constitutively and could serve as a promoter for transgene expression, reporter lines driven by its promoter were tracked across the life cycle, establishing housekeeping-level activity.

    Evidence CRISPR/Cas9 transgenic reporter lines using the RPS30 promoter to drive GFP and mCherry-luciferase, with fluorescence/luminescence across blood, mosquito, and liver stages in NF54 and NF135.C10

    PMID:32587831

    Open questions at the time
    • Characterizes promoter transcriptional activity, not the RPS30 protein or its mechanism
    • Does not test RPS30 protein function, essentiality, or interactions
    • No link between constitutive expression and a specific ribosomal role established

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether RPS30 has any specific molecular function or binding interaction beyond its structural membership in the 40S subunit remains undefined in the available corpus.
  • No experiment has defined an RPS30-specific molecular activity
  • No RPS30-specific binding partners or substrates identified
  • Essentiality and loss-of-function phenotype of RPS30 not established

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
40S small ribosomal subunit of the P. falciparum 80S ribosome

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2014 Cryo-EM structure of the P. falciparum 80S ribosome at 3.2 Å resolution revealed the structural context of the small (40S) ribosomal subunit, of which RPS30 (PF3D7_0219200) is a constituent component, bound to emetine at the E-site; emetine blocks mRNA/tRNA translocation by interacting with the small subunit E-site. Cryo-EM structure determination at 3.2 Å resolution of the 80S ribosome–emetine complex eLife Medium 24913268
2020 The promoter of RPS30 (PF3D7_0219200) drives strong, constitutive expression of fluorescent reporter proteins (GFP, mCherry-luciferase) throughout the complete P. falciparum life cycle including liver stages, demonstrating that RPS30 is a housekeeping gene with constitutive transcriptional activity. CRISPR/Cas9-based transgenic reporter lines using the RPS30 promoter to drive GFP/mCherry-luciferase expression; fluorescence/luminescence quantification across blood, mosquito, and liver stages Frontiers in cellular and infection microbiology Medium 32587831
2015 Cryo-EM reconstructions of the P. falciparum 80S ribosome purified from blood-stage schizonts at sub-nanometer resolution provided atomic models of the ribosomal subunits, establishing structural features that differentiate the P. falciparum ribosome (including its 40S subunit, of which RPS30 is a component) from mammalian ribosomes. Cryo-EM with five reconstructions of ribosomes purified from P. falciparum schizonts; atomic model building by flexible fitting Nucleic acids research Medium 26432834

Source papers

Stage 0 corpus · 5 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine. eLife 276 24913268
1991 Chloroquine inhibits heme-dependent protein synthesis in Plasmodium falciparum. Proceedings of the National Academy of Sciences of the United States of America 56 2052558
2015 Dynamical features of the Plasmodium falciparum ribosome during translation. Nucleic acids research 46 26432834
2020 Generation of Novel Plasmodium falciparum NF135 and NF54 Lines Expressing Fluorescent Reporter Proteins Under the Control of Strong and Constitutive Promoters. Frontiers in cellular and infection microbiology 11 32587831
2000 An in vitro system from Plasmodium falciparum active in endogenous mRNA translation. Memorias do Instituto Oswaldo Cruz 6 10733745