Affinage · Plasmodium

PBANKA_0506100

PHAX domain-containing protein, putative

Audit flag: identity unverified
Annotated
2026-09-07
1 papers in source corpus 1 papers cited in narrative 1 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PBANKA_0506100 is a PHAX domain-containing protein of Plasmodium berghei identified as an interaction partner of GBP2 by IP-MS, placing it in the vicinity of the exportin-1-mediated mRNA export machinery where it has been posited to act as an adaptor (PMID:34604117). Beyond this single co-purification with GBP2, no direct functional experiments have been performed on PBANKA_0506100 itself, and the corpus establishes nothing about this protein beyond its membership in this interaction (PMID:34604117).

Mechanistic history

Synthesis pass · year-by-year structured walk · 1 step
  1. 2021 Low

    To begin mapping the Plasmodium mRNA export machinery, it was unknown which proteins associate with GBP2; IP-MS revealed PBANKA_0506100 as a GBP2 interaction partner, placing this PHAX domain-containing protein within the exportin-1 export pathway.

    Evidence Immunoprecipitation coupled to mass spectrometry (IP-MS) in P. berghei

    PMID:34604117

    Open questions at the time
    • Single Co-IP/MS without reciprocal pull-down or direct validation of the interaction from PBANKA_0506100's perspective
    • No functional assay (knockout, knockdown, or complementation) on PBANKA_0506100 itself
    • The proposed adaptor role for exportin-1-mediated mRNA export is inferred from GBP2 context, not demonstrated for PBANKA_0506100

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether PBANKA_0506100 has any direct, autonomous function in mRNA export or another process remains unestablished.
  • No loss-of-function phenotype for PBANKA_0506100
  • No confirmed molecular activity, substrate, or localization for the protein itself
  • No structural or domain-function data beyond annotation as PHAX domain-containing

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Partners

Evidence

Reading pass · 1 per-paper finding extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2021 The PHAX domain-containing protein (PBANKA_0506100) was identified as an interaction partner of GBP2 by immunoprecipitation coupled to mass spectrometry (IP-MS), implicating it as an adaptor protein for exportin-1 in the mRNA export pathway of malaria parasites. Immunoprecipitation coupled to mass spectrometry (IP-MS) Frontiers in cellular and infection microbiology Low 34604117

Source papers

Stage 0 corpus · 1 paper · ranked by NIH iCite citations
Year Title Journal Citations PMID
2021 Roles and Cellular Localization of GBP2 and NAB2 During the Blood Stage of Malaria Parasites. Frontiers in cellular and infection microbiology 6 34604117