Affinage · Plasmodium

PF3D7_1464900

ATP-dependent zinc metalloprotease FTSH, putative

Audit flag: identity unverified
Annotated
2026-09-08
4 papers in source corpus 2 papers cited in narrative 2 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_1464900 is a putative ATP-dependent zinc metalloprotease of the FtsH family in Plasmodium falciparum, associated with the parasite's organellar membrane systems. It was recovered in the apicoplast proteome by proximity biotinylation, placing it within that organelle (PMID:30212465), and it co-purifies with the stomatin-like protein STOML, with the complex localizing to distinct puncta at branching points and endings of the asexual blood-stage mitochondrial network in an arrangement modeled as analogous to the bacterial HflK/C vault-like structure around FtsH hexamers (PMID:41662436). Beyond this organellar localization and the STOML association (PMID:30212465, PMID:41662436), the enzymatic substrates, catalytic activity, and functional contribution of PF3D7_1464900 to blood-stage development have not been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 2 steps
  1. 2018 Medium

    Establishing where this putative protease resides was the first step; proteomic mapping placed PF3D7_1464900 in the apicoplast, giving it an organellar context.

    Evidence Proximity biotinylation (BioID) proteomics with machine-learning classification of the apicoplast proteome

    PMID:30212465

    Open questions at the time
    • FtsH listed among 346 proteins without individual functional validation
    • No evidence of catalytic activity or substrate
    • Apicoplast assignment not cross-validated against mitochondrial localization
  2. 2026 Medium

    Identifying a binding partner and its subcellular distribution addressed whether PF3D7_1464900 acts within a defined complex; pulldowns and imaging linked it to STOML at discrete mitochondrial-network puncta, invoking a bacterial HflK/C-FtsH vault analogy.

    Evidence Co-IP/pulldown of epitope-tagged STOML with mass spectrometry, AlphaFold2 complex modeling, and live imaging of endogenous epitope-tagged proteins

    PMID:41662436

    Open questions at the time
    • Single pulldown without reciprocal Co-IP or in vitro reconstitution of the complex
    • FtsH zinc-metalloprotease activity not biochemically demonstrated
    • Apparent mitochondrial localization here contrasts with the earlier apicoplast assignment; dual/definitive targeting unresolved

Open questions

Synthesis pass · forward-looking unresolved questions
  • The enzymatic substrates, catalytic activity, and functional requirement of PF3D7_1464900 for parasite development remain unknown.
  • No substrate identified for the putative protease
  • No genetic knockout/knockdown phenotype established
  • Enzymatic zinc-metalloprotease activity not directly measured

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
STOML-FtsH complex (HflK/C-FtsH vault-like analog)

Evidence

Reading pass · 2 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2018 PF3D7_1464900 (ATP-dependent zinc metalloprotease FtsH) was identified as a component of the apicoplast proteome in P. falciparum using proximity biotinylation (BioID) combined with machine learning, placing it within the apicoplast organelle. Proximity biotinylation proteomics (BioID) combined with machine learning classification PLoS biology Medium 30212465
2026 P. falciparum FtsH (PF3D7_1464900), a zinc-dependent metalloprotease, was identified as a likely interaction partner of stomatin-like protein (STOML) by pulldown experiments. The complex localizes to distinct puncta at branching points and endings of the asexual blood-stage mitochondrial network, analogous to the bacterial HflK/C vault-like structure around FtsH hexamers. Pulldown/co-immunoprecipitation of epitope-tagged STOML followed by mass spectrometry; AlphaFold2 structural prediction for complex modeling; live imaging of epitope-tagged endogenous proteins PLoS pathogens Medium 41662436

Source papers

Stage 0 corpus · 4 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2018 Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. PLoS biology 85 30212465
2020 The Myosin Family of Mechanoenzymes: From Mechanisms to Therapeutic Approaches. Annual review of biochemistry 61 32169021
2021 Structure, function, and substrates of Clp AAA+ protease systems in cyanobacteria, plastids, and apicoplasts: A comparative analysis. The Journal of biological chemistry 58 33497624
2026 Plasmodium falciparum stomatin-like protein forms a putative complex with a metalloprotease in distinct mitochondrial loci. PLoS pathogens 1 41662436