Affinage · Plasmodium

TRX1

PF3D7_1457200 · thioredoxin 1

Annotated
2026-09-08
16 papers in source corpus 12 papers cited in narrative 12 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_1457200 (TRX1) is a cytosolic ~13-kDa thioredoxin that serves as a central electron-shuttling hub of the P. falciparum redox network, coupling the NADPH-dependent reductase system to a broad set of downstream target proteins (PMID:11013257, PMID:19360125). It carries a CGPC active-site motif (Cys30–Cys33) whose two cysteines are both essential for catalysis, plus a non-active-site Cys43 that mediates dimer formation (PMID:11223129, PMID:38635664). TRX1 is reduced with high efficiency by P. falciparum TrxR and also cross-reacts with human TrxR; the crystal structure of the PfTrxR–TRX1 complex shows that binding induces rearrangements of the reductase C-terminal arm and insertion loop, with an interface distinct from the human counterpart (PMID:11013257, PMID:23845423). Once reduced, TRX1 reduces GSSG (roughly five-fold faster than orthologous thioredoxins) and S-nitrosoglutathione, and hands electrons to peroxiredoxin partners, including an imported human peroxiredoxin 2 (PMID:11013257, PMID:19666612). Beyond canonical disulfide reduction, TRX1 acts as a redox regulator of metabolic enzymes: trapping chromatography with resolving-cysteine mutants captured ~17–20 target proteins spanning protein biosynthesis, energy metabolism, and signal transduction, and TRX1 activates ornithine aminotransferase ~10-fold (via OAT Cys154/Cys163) and enhances GAPDH and LDH activity (PMID:19360125, PMID:20673832, PMID:20307687). TRX1 additionally catalyzes protein deglutathionylation, is itself a glutathionylation target, and mediates both denitrosylation (via Cys30/Cys33) and transnitrosylation (via Cys43) (PMID:21595565, PMID:24256207). Solution NMR structures of both redox states reveal a canonical thioredoxin α/β-fold with oxidation-coupled conformational changes and multiple coexisting sub-states (PMID:38635664).

Mechanistic history

Synthesis pass · year-by-year structured walk · 11 steps
  1. 2000 High

    Establishing that TRX1 is a bona fide, kinetically efficient thioredoxin was the necessary first step to place it within the parasite's NADPH-driven redox chain.

    Evidence Recombinant expression, steady-state kinetics, and redox potential measurement with both P. falciparum and human TrxR

    PMID:11013257

    Open questions at the time
    • Physiological in vivo substrates not yet defined
    • Cellular role during infection not addressed
  2. 2001 High

    Mutational dissection defined which cysteines drive catalysis versus oligomerization, mapping the functional chemistry onto specific residues.

    Evidence Site-directed mutagenesis, DTNB reactivity assay, and steady-state kinetics with recombinant PfTrxR

    PMID:11223129

    Open questions at the time
    • Functional significance of Cys43-mediated dimerization in vivo unresolved
  3. 2006 High

    Comparing peroxiredoxin preference resolved the compartmental division of labor between cytosolic TRX1 and mitochondrial PfTrx2 as reducing partners.

    Evidence Recombinant kinetics and peroxiredoxin mutagenesis showing weak preference of mitochondrial Prx for TRX1

    PMID:16879648

    Open questions at the time
    • Physiological flux through TRX1-Prx couple in living parasites not quantified
  4. 2009 High

    Trapping-based target capture transformed TRX1 from a generic disulfide reductase into a defined regulator by naming ~17 candidate substrates and validating direct binding and functional activation.

    Evidence Active-site-trap affinity chromatography, mass spectrometry, BIAcore SPR, and OAT enzymatic assay

    PMID:19360125

    Open questions at the time
    • Most captured targets lack functional validation
    • In vivo redox regulation of these targets untested
  5. 2009 High

    Demonstrating that imported human Prx-2 uses TRX1 tied the parasite thioredoxin system to host-derived peroxidase capacity.

    Evidence Enzyme kinetics with recombinant proteins plus confocal and immunogold EM

    PMID:19666612

    Open questions at the time
    • Contribution to parasite survival under oxidative stress not measured
  6. 2010 Medium

    Localizing TRX1 to the cytosol and mapping TrxR's dual targeting confirmed where TRX1 acts and how its electron donor reaches it.

    Evidence GFP-fusion subcellular localization by confocal microscopy

    PMID:21203490

    Open questions at the time
    • Functional consequence of TrxR dual localization inferred, not directly demonstrated for TRX1
  7. 2010 High

    Structural and mutational work on OAT provided the mechanistic basis for TRX1-dependent activation of a metabolic enzyme via parasite-specific cysteines absent in the human ortholog.

    Evidence OAT crystal structure, cysteine mutagenesis, and enzymatic activation assays with recombinant TRX1

    PMID:20673832

    Open questions at the time
    • In vivo relevance of TRX1-OAT activation to polyamine/proline metabolism untested
  8. 2010 Medium

    A second trapping screen extended TRX1's regulatory reach to central glycolysis, showing it enhances GAPDH and LDH activity.

    Evidence C33S-mutant affinity chromatography, LC-MS/MS, and enzymatic activity assays

    PMID:20307687

    Open questions at the time
    • Whether these targets are redox-regulated under physiological conditions unknown
    • Overlap/redundancy among captured targets not resolved
  9. 2011 Medium

    Identifying deglutathionylase activity and TRX1's own glutathionylation broadened its function to reversible protein S-glutathionylation control.

    Evidence Enzymatic deglutathionylation assays and glutathionylome proteomics by mass spectrometry

    PMID:21595565

    Open questions at the time
    • Physiological deglutathionylation substrates not defined
    • Regulatory role of TRX1 self-glutathionylation unclear
  10. 2014 Medium

    Distinguishing active-site-mediated denitrosylation from Cys43-mediated transnitrosylation established TRX1 as a bidirectional player in nitrosative signaling.

    Evidence Biotin-switch assay, mass spectrometry, and mechanistic mutagenesis of active-site versus Cys43

    PMID:24256207

    Open questions at the time
    • Cellular targets of TRX1 trans-/denitrosylation unidentified
    • In vivo balance of the two activities unknown
  11. 2024 High

    High-resolution NMR structures in both redox states provided an atomic and dynamic framework linking active-site oxidation to defined conformational transitions.

    Evidence Solution NMR structure determination and high-pressure NMR of reduced and oxidized TRX1

    PMID:38635664

    Open questions at the time
    • Structural basis of target selectivity not addressed
    • Conformational sub-states not linked to specific catalytic steps

Open questions

Synthesis pass · forward-looking unresolved questions
  • The in vivo essentiality of TRX1 and the physiological relevance of its captured metabolic and nitrosative targets during infection remain open.
  • No genetic knockout/knockdown phenotype in the corpus
  • Which captured targets are regulated by TRX1 in living parasites is unresolved

Mechanism profile

Synthesis pass · controlled-vocabulary classification

Evidence

Reading pass · 12 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2000 TRX1 (PfTrx, 13 kDa) was cloned, expressed, and biochemically characterized. It has a midpoint redox potential of -270 mV and is reduced by both P. falciparum TrxR (Km = 10.4 µM, kcat = 3100 min⁻¹) and human TrxR (Km = 2 µM, kcat = 3300 min⁻¹). Reduced TRX1 reduces GSSG with a rate constant k2 = 0.039 µM⁻¹ min⁻¹, approximately 5-fold faster than thioredoxins from human, Drosophila, or E. coli, and also reduces S-nitrosoglutathione. Recombinant protein expression, steady-state enzyme kinetics, redox potential measurement The Journal of biological chemistry High 11013257
2001 TRX1 active-site cysteines (Cys30 and Cys33) are both essential for catalytic activity as shown by mutational analyses. A third cysteine (Cys43) outside the active site is partially responsible for dimer formation; mutating Cys43 to Ala reduces dimerization. All three cysteines are accessible to DTNB modification, with Cys33 more reactive than Cys30. Steady-state kinetics with PfTrxR give Km values of 0.8–2.1 µM for TRX1, ~250-fold lower than for E. coli thioredoxin. Site-directed mutagenesis, DTNB reactivity assay, steady-state kinetics with recombinant PfTrxR Molecular and biochemical parasitology High 11223129
2006 The mitochondrial peroxiredoxin of P. falciparum strongly prefers the mitochondrial thioredoxin (PfTrx2) over the cytosolic TRX1 as a reducing partner (Km 11.6 µM vs. 130.4 µM for TRX1). Substitution of residues Asn62/Tyr63 and Phe139/Ala140 in the peroxiredoxin reduced the Km for TRX1 but had no effect on Km for PfTrx2, indicating these residues mediate substrate discrimination. Recombinant protein expression, steady-state kinetics, site-directed mutagenesis of the peroxiredoxin Molecular microbiology High 16879648
2009 Human peroxiredoxin 2 (hPrx-2), imported into the P. falciparum cytosol, accepts cytosolic TRX1 as a reducing substrate in enzyme kinetic analyses, accounting for roughly 50% of thioredoxin peroxidase activity in parasite extracts. Enzyme kinetic analysis with recombinant proteins, confocal microscopy, immunogold electron microscopy Proceedings of the National Academy of Sciences of the United States of America High 19666612
2009 Using an active-site mutant of TRX1 lacking the resolving cysteine (to trap substrates via mixed disulfide), 17 putative redox-regulated target proteins of TRX1 were identified by affinity chromatography and mass spectrometry, including proteins in protein biosynthesis, energy metabolism, and signal transduction. TRX1 binding to S-adenosyl-L-homocysteine hydrolase and ornithine aminotransferase (OAT) was verified by surface plasmon resonance (BIAcore), and TRX1 was shown to enhance OAT enzymatic activity in functional assays. Active-site mutant affinity chromatography, mass spectrometry, BIAcore surface plasmon resonance, enzymatic activity assay PLoS pathogens High 19360125
2010 TRX1 localizes to the cytoplasm of P. falciparum blood-stage parasites. Using alternative translation initiation, thioredoxin reductase (TrxR) achieves dual cytosolic and mitochondrial localization, providing TRX1's electron donor in the cytosol. Systematic subcellular localization study using GFP fusions and confocal microscopy PLoS pathogens Medium 21203490
2010 TRX1 activates P. falciparum OAT activity approximately 10-fold. Crystal structure of OAT and site-directed mutagenesis identified Cys154 and Cys163 (within the substrate-binding loop, absent in human OAT) as the residues that mediate interaction with TRX1; the Cys154→Ser mutant shows strongly reduced OAT activity due to impaired ornithine binding. Crystal structure of OAT (2.3 Å), site-directed mutagenesis of OAT cysteines, enzymatic activity assays with recombinant TRX1 Journal of molecular biology High 20673832
2010 Affinity chromatography with a resolving-cysteine mutant of TRX1 (C33S) captured 20 target proteins from P. falciparum extracts, including four glycolytic enzymes (hexokinase, GAPDH, phosphoglycerate mutase, LDH). TRX1 enhanced the enzymatic activity of PfGAPDH and PfLDH in functional assays. Cysteine-mutant affinity chromatography, LC-MS/MS, enzymatic activity assay Parasitology international Medium 20307687
2011 TRX1 (thioredoxin 1) efficiently catalyzes protein deglutathionylation in P. falciparum, demonstrated by enzymatic deglutathionylation assays. TRX1 was itself identified as a target of S-glutathionylation in the parasite glutathionylome. Enzymatic deglutathionylation assay, affinity purification with biotin-maleimide, proteomic analysis by mass spectrometry Antioxidants & redox signaling Medium 21595565
2013 Crystal structure of the P. falciparum TrxR–TRX1 complex was solved, revealing that complex formation induces rearrangements of the TrxR flexible C-terminal arm and an insertion loop. Amino acid residues at the TrxR–TRX1 interface were functionally analyzed by mutagenesis. The structure shows how TRX1 is bound and reduced by PfTrxR, with key differences from the human TrxR–thioredoxin interface. X-ray crystallography (crystal structure of TrxR–TRX1 complex), active-site mutagenesis, cell biological inhibitor experiments Journal of molecular biology High 23845423
2014 TRX1 (PfTrx1) can be S-nitrosylated at its non-active-site cysteine (Cys43). Mechanistic studies demonstrated that TRX1 possesses both denitrosylating activity (mediated by active-site cysteines Cys30/Cys33) and transnitrosylating activity (mediated by Cys43). Biotin-switch assay, mass spectrometry, mechanistic mutagenesis/functional assays Antioxidants & redox signaling Medium 24256207
2024 Solution structures of TRX1 in both reduced and oxidized forms were determined by high-resolution NMR. The protein adopts an α/β-fold with a mixed five-stranded β-sheet sandwiched between 4 helices (β1α1β2α2β3α3β4β5α4 topology). Oxidation of the CGPC active-site motif (Cys30–Cys33 disulfide) induces significant structural changes in residues Phe25–Ile36, Thr70–Thr74, and Leu88–Asn91. High-pressure NMR identifies at least three coexisting conformational sub-states in both redox forms. High-resolution NMR (solution structure determination of ¹³C/¹⁵N-labeled protein), high-pressure NMR spectroscopy PloS one High 38635664

Source papers

Stage 0 corpus · 16 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2000 The thioredoxin system of the malaria parasite Plasmodium falciparum. Glutathione reduction revisited. The Journal of biological chemistry 201 11013257
2010 Compartmentation of redox metabolism in malaria parasites. PLoS pathogens 122 21203490
2011 Protein S-glutathionylation in malaria parasites. Antioxidants & redox signaling 87 21595565
2009 The malarial parasite Plasmodium falciparum imports the human protein peroxiredoxin 2 for peroxide detoxification. Proceedings of the National Academy of Sciences of the United States of America 77 19666612
2009 Identification of proteins targeted by the thioredoxin superfamily in Plasmodium falciparum. PLoS pathogens 69 19360125
2005 Expression of mRNAs and proteins for peroxiredoxins in Plasmodium falciparum erythrocytic stage. Parasitology international 47 15710548
2006 Structural and biochemical characterization of a mitochondrial peroxiredoxin from Plasmodium falciparum. Molecular microbiology 44 16879648
2001 The malaria parasite Plasmodium falciparum possesses a functional thioredoxin system. Molecular and biochemical parasitology 42 11223129
2013 Crystal structure of the Plasmodium falciparum thioredoxin reductase-thioredoxin complex. Journal of molecular biology 33 23845423
2010 Redox regulation of Plasmodium falciparum ornithine δ-aminotransferase. Journal of molecular biology 31 20673832
2003 Plasmodium falciparum thioredoxins and glutaredoxins as central players in redox metabolism. Redox report : communications in free radical research 29 14962358
2014 Protein S-nitrosylation in Plasmodium falciparum. Antioxidants & redox signaling 25 24256207
2013 Expression of cytosolic peroxiredoxins in Plasmodium berghei ookinetes is regulated by environmental factors in the mosquito bloodmeal. PLoS pathogens 20 23382676
2014 Crystal structure and solution characterization of the thioredoxin-2 from Plasmodium falciparum, a constituent of an essential parasitic protein export complex. Biochemical and biophysical research communications 15 25475729
2010 Target proteins of the cytosolic thioredoxin in Plasmodium falciparum. Parasitology international 12 20307687
2024 Solution structure and pressure response of thioredoxin-1 of Plasmodium falciparum. PloS one 1 38635664