Affinage · Plasmodium

PF3D7_1408600

40S ribosomal protein S8e, putative

Annotated
2026-09-08
4 papers in source corpus 3 papers cited in narrative 3 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_1408600 (S8e) is a constituent protein of the small (40S) subunit of the Plasmodium falciparum 80S ribosome, established solely through structural biology (PMID:24913268, PMID:40825879). High-resolution cryo-EM of the Pf80S ribosome placed S8e within the small subunit architecture (PMID:24913268), subsequent cryo-EM reconstructions of blood-stage schizont ribosomes confirmed its presence and helped delineate structural differences from mammalian ribosomes (PMID:26432834), and in situ cryo-electron tomography of actively translating ribosomes inside infected erythrocytes established S8e as a small-subunit component in the physiological translation context during elongation (PMID:40825879). Beyond this membership in the 40S subunit, no specific enzymatic activity, binding partner, post-translational modification, or individual functional role has been experimentally attributed to S8e in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2014 Medium

    Before any structure of the malarial ribosome, the composition and molecular architecture of the P. falciparum small subunit were undefined; the first high-resolution cryo-EM structure resolved the subunit and placed S8e within it, establishing S8e as a bona fide small-subunit component.

    Evidence Cryo-EM structure of the P. falciparum 80S ribosome at 3.2 Å in complex with emetine

    PMID:24913268

    Open questions at the time
    • No functional experiment interrogates S8e itself; only its presence in the complex is inferred from the structure
    • No binding partner, PTM, or enzymatic role assigned to S8e specifically
  2. 2015 Low

    To test whether the ribosome architecture holds in natively purified particles and how it diverges from the host, cryo-EM reconstructions from blood-stage schizonts confirmed S8e as a small-subunit component and identified structural differences from mammalian ribosomes.

    Evidence Five sub-nanometer cryo-EM reconstructions with atomic model building by flexible fitting from P. falciparum schizont ribosomes

    PMID:26432834

    Open questions at the time
    • Establishes composition only; no experiment interrogates S8e function or interactions
    • Does not localize S8e-specific structural divergences from the host protein
  3. 2025 Medium

    To determine whether S8e is part of the ribosome under physiological translation rather than only in purified particles, in situ cryo-ET of actively translating ribosomes inside infected erythrocytes confirmed S8e in the small subunit across elongation states.

    Evidence In situ cryo-electron tomography of P. falciparum-infected human erythrocytes yielding eight high-resolution structures of native translating ribosomes

    PMID:40825879

    Open questions at the time
    • No experiment isolates the contribution of S8e to elongation
    • No functional or interaction data specific to S8e

Open questions

Synthesis pass · forward-looking unresolved questions
  • It remains unknown whether S8e has any function, interaction, or regulatory role beyond its structural membership in the 40S subunit, and whether it is dispensable or essential in P. falciparum.
  • No genetic knockout/knockdown data for S8e
  • No binding partners or PTMs identified
  • No S8e-specific role in translation initiation, elongation, or subunit assembly established

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
40S small ribosomal subunit of the P. falciparum 80S ribosome

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2014 Cryo-EM structure of the P. falciparum 80S ribosome at 3.2 Å resolution revealed the molecular architecture of the small subunit, in which S8e (PF3D7_1408600) is present as a component, and established the E-site of the small subunit as the binding site for emetine, which blocks mRNA/tRNA translocation. Cryo-EM structure determination at 3.2 Å resolution of the P. falciparum 80S ribosome in complex with emetine eLife Medium 24913268
2015 Five cryo-EM reconstructions of P. falciparum 80S ribosomes purified from blood-stage schizonts at sub-nanometer resolution revealed structural features of the ribosome, confirming S8e (PF3D7_1408600) as a component of the small subunit, and identified structural differences from mammalian ribosomes. Cryo-EM reconstruction and atomic model building by flexible fitting from P. falciparum blood-stage schizont ribosomes Nucleic acids research Low 26432834
2025 In situ cryo-electron tomography of actively translating P. falciparum ribosomes inside infected erythrocytes determined eight high-resolution structures of the native malarial ribosome in elongation states, establishing S8e (PF3D7_1408600) as a component of the small subunit in the physiological translation context and revealing new molecular details of the elongation cycle. In situ cryo-electron tomography of P. falciparum-infected human erythrocytes; high-resolution structural determination of native translating ribosomes Nature structural & molecular biology Medium 40825879

Source papers

Stage 0 corpus · 4 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine. eLife 272 24913268
2015 Dynamical features of the Plasmodium falciparum ribosome during translation. Nucleic acids research 45 26432834
2025 Integrated structural biology of the native malarial translation machinery and its inhibition by an antimalarial drug. Nature structural & molecular biology 7 40825879
2025 Antimalarial drug artemisinin stabilizes PfRACK1 binding to the ribosome. Structure (London, England : 1993) 3 40480224