Affinage · Plasmodium

PF3D7_1356600

regulator of chromosome condensation, putative

Audit flag: identity unverified
Annotated
2026-09-08
1 papers in source corpus 1 papers cited in narrative 4 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_1356600 (PfRCC-PIP) is an RCC1-motif-containing regulatory protein of Plasmodium falciparum that functions as a phosphatase-anchoring partner of the parasite Protein Phosphatase type-1 (PfPP1), which it binds directly in vitro and forms a complex with in the parasite (PMID:30429842). In a heterologous Xenopus oocyte system, PfRCC-PIP interacts with endogenous PP1 and synergizes with suboptimal progesterone to promote oocyte maturation, indicating it acts as a positive regulator of PP1 activity (PMID:30429842). Its RCC1-motif region additionally binds the parasite calcium-dependent protein kinase CDPK7, positioning PfRCC-PIP as a scaffold that could coordinate both kinase and phosphatase activities (PMID:30429842), and attempted knock-out failed to yield viable parasites, consistent with an essential role (PMID:30429842). Beyond these interaction and viability findings from a single study, no further mechanistic detail — substrate specificity, structural basis of binding, or in-parasite regulatory targets — has been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2018 Medium

    Established that PF3D7_1356600 is a direct binding partner of the parasite phosphatase PfPP1, defining its first molecular interaction and its identity as a phosphatase-associated protein.

    Evidence In vitro binding assay and co-immunoprecipitation from P. falciparum lysate

    PMID:30429842

    Open questions at the time
    • The binding interface and RCC1-motif requirement for PfPP1 interaction were not mapped by mutagenesis
    • Stoichiometry and other components of the parasite PfPP1 complex are undefined
    • No in-parasite dephosphorylation substrate was identified
  2. 2018 Medium

    Addressed whether the PfPP1 interaction is merely structural or regulatory, showing PfRCC-PIP activates PP1 in a functional context.

    Evidence Xenopus oocyte maturation assay with endogenous PP1 and suboptimal progesterone doses

    PMID:30429842

    Open questions at the time
    • Activation was shown against Xenopus PP1 in a heterologous system, not against PfPP1 in the parasite
    • The biochemical mechanism of PP1 activation (versus canonical inhibition) is unresolved
    • No direct phosphatase activity measurement on defined substrates
  3. 2018 Low

    Extended the protein's role beyond phosphatase anchoring by identifying a kinase partner, raising the possibility of a dual scaffolding function.

    Evidence Pulldown/binding assay of the RCC1-motif-containing region with the kinase CDPK7

    PMID:30429842

    Open questions at the time
    • Single interaction assay with a protein fragment, no mutagenesis or orthogonal/reciprocal validation
    • Whether PfPP1 and CDPK7 bind simultaneously or competitively is unknown
    • Functional consequence of the CDPK7 interaction in the parasite is untested
  4. 2018 Low

    Assessed the biological importance of the gene, indicating it is required for blood-stage parasite viability.

    Evidence Reverse genetics / attempted gene knock-out (failure to recover viable KO parasites)

    PMID:30429842

    Open questions at the time
    • Negative-selection inference from failure to obtain KO; no conditional knock-out or complementation to confirm essentiality
    • The essential cellular process the protein supports is not defined
    • Stage-specific requirements were not examined

Open questions

Synthesis pass · forward-looking unresolved questions
  • It remains unknown how PfRCC-PIP coordinates PfPP1 and CDPK7 activities in the parasite, what phosphoprotein substrates it governs, and whether its scaffolding function underlies its essentiality.
  • No in-parasite substrate or dephosphorylation/phosphorylation target identified
  • No structural model or mapped binding interfaces
  • Localization and cell-cycle timing of the protein not characterized in the corpus

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
PfPP1-containing complex (with PF3D7_1356600) [#0]

Evidence

Reading pass · 4 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2018 PF3D7_1356600 (PfRCC-PIP) directly interacts with PfPP1 (Protein Phosphatase type-1) in vitro and is present in a complex with PfPP1 in the parasite, establishing it as a major binding partner of PfPP1. In vitro binding assay and co-immunoprecipitation from parasite lysate Frontiers in microbiology Medium 30429842
2018 PfRCC-PIP (PF3D7_1356600) interacts with endogenous Xenopus PP1 and acts in synergy with suboptimal doses of progesterone to trigger oocyte maturation, indicating a regulatory (activating) effect on PP1 phosphatase activity. Xenopus oocyte functional assay Frontiers in microbiology Medium 30429842
2018 The RCC1-motif-containing region of PfRCC-PIP (PF3D7_1356600) interacts with the parasite kinase CDPK7, identifying it as a kinase anchoring protein in addition to its role as a phosphatase anchor. Protein interaction assay (pulldown/binding assay with RCC1-containing protein region) Frontiers in microbiology Low 30429842
2018 Reverse genetic studies (attempted knock-out) indicated that PfRCC-PIP (PF3D7_1356600) is essential for parasite viability, as no viable knock-out parasites could be obtained. Reverse genetics / attempted gene knock-out Frontiers in microbiology Low 30429842

Source papers

Stage 0 corpus · 1 paper · ranked by NIH iCite citations
Year Title Journal Citations PMID
2018 Characterization of a Protein Phosphatase Type-1 and a Kinase Anchoring Protein in Plasmodium falciparum. Frontiers in microbiology 11 30429842