Affinage · Plasmodium

RAB11b

PF3D7_1340700 · ras-related protein Rab-11B

Annotated
2026-09-08
15 papers in source corpus 6 papers cited in narrative 6 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

RAB11b (PF3D7_1340700) is a Rab GTPase of the malaria parasite that functions in vesicular trafficking supporting the biogenesis of pellicular structures across the parasite life cycle (PMID:12657463, PMID:39366980). In P. yoelii ookinetes, the RAB11b ortholog acts as a cargo receptor for subpellicular-microtubule dynein-driven transport: it interacts with the dynein heavy chain DHC3 in a DHC3-dependent manner, and its genetic disruption phenocopies DHC3 deficiency, producing defective apical organelle formation, aberrant ookinete morphology, impaired gliding motility, and failure of mosquito infection (PMID:39366980). Consistent with a role in pellicle biogenesis, the RAB11b ortholog localizes to the inner membrane complex (IMC) in P. yoelii schizonts (PMID:35775739). In P. falciparum schizonts, RAB11b physically associates with the SCF ubiquitin ligase components PfSKP1 and PfFBXO1 alongside IMC-associated proteins, linking ubiquitin-mediated regulation to IMC biogenesis (PMID:40592953), and it co-immunoprecipitates with the artemisinin-resistance protein K13 as part of a K13-associated trafficking network (PMID:32310999). Beyond these interaction and localization findings, the biochemical activity of RAB11b itself — its GTPase cycle, effectors, and direct cargo — has not been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 2003 Low

    Establishing that PF3D7_1340700 is an expressed member of the parasite's Rab GTPase repertoire was the first step in defining it as a candidate trafficking regulator rather than a pseudogene or unexpressed locus.

    Evidence Bioinformatic family identification with RT-PCR transcription testing in P. falciparum-infected erythrocytes

    PMID:12657463

    Open questions at the time
    • No functional or localization data specific to RAB11b
    • GTPase activity and cycle not demonstrated
  2. 2020 Low

    Placing RAB11b within the K13 artemisinin-resistance interactome connected it to endocytic/vesicular trafficking machinery in the intra-erythrocytic stage.

    Evidence K13 monoclonal-antibody immunoprecipitation followed by mass spectrometry in gene-edited P. falciparum

    PMID:32310999

    Open questions at the time
    • RAB11b identified among many Rab GTPases with no RAB11b-specific functional follow-up
    • Direct versus indirect association with K13 not resolved
  3. 2020 Low

    Demonstrating RAB11b protein expression during the zygote-to-ookinete transition established it as a distinct, stage-specific family member co-expressed with RAB11A rather than a redundant paralog.

    Evidence Western blot and immunofluorescence of endogenous PbRAB11b across the transition time course in P. berghei

    PMID:32463831

    Open questions at the time
    • No direct functional manipulation of RAB11b itself
    • Relationship to RAB11A function not defined
  4. 2022 Low

    Localizing the RAB11b ortholog to the inner membrane complex in schizonts assigned it a spatial niche at the developing pellicle, framing a role in pellicle/IMC biogenesis.

    Evidence Immunofluorescence of episomal N-terminal HA-tagged protein co-stained with IMC marker GAP45 in P. yoelii schizonts

    PMID:35775739

    Open questions at the time
    • Localization from episomal overexpression, not endogenous tagging
    • No loss-of-function data for RAB11b in this study
  5. 2024 Medium

    Identifying RAB11b as a DHC3-dependent receptor for subpellicular-microtubule dynein cargoes provided the first direct mechanistic function: linking motor-driven transport to apical organelle assembly and ookinete morphogenesis.

    Evidence Co-immunoprecipitation with DHC3 plus conditional knockout with morphology, gliding, apical-organelle, and mosquito-infectivity readouts in P. yoelii

    PMID:39366980

    Open questions at the time
    • Single lab, single study in P. yoelii
    • Specific cargoes transported via RAB11b not identified
    • GTPase-cycle dependence of the receptor function not tested
  6. 2025 Low

    Detecting RAB11b in PfSKP1 and PfFBXO1 pull-downs alongside IMC proteins hinted at ubiquitin-ligase regulation of RAB11b-associated IMC biogenesis in the blood stage.

    Evidence Co-immunoprecipitation followed by LC-MS/MS from schizont-stage P. falciparum expressing HA-tagged PfSKP1 and PfFBXO1

    PMID:40592953

    Open questions at the time
    • Single Co-IP/MS with no RAB11b-specific functional follow-up
    • Whether RAB11b is a ubiquitylation substrate of the SCF complex not tested
    • Direct versus indirect association not established

Open questions

Synthesis pass · forward-looking unresolved questions
  • The intrinsic biochemistry of RAB11b — its GTP/GDP cycle, GEF/GAP regulators, and the identity of cargoes it delivers — remains undefined, as does whether its blood-stage IMC/SCF/K13 associations reflect the same cargo-receptor function seen in ookinetes.
  • No reconstitution of RAB11b GTPase or effector binding
  • No cargo directly identified
  • Cross-stage and cross-species conservation of function untested

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
K13-associated protein networkPfSCF ubiquitin ligase complex association (PfSKP1, PfFBXO1)

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2024 RAB11b (ortholog) interacts with the dynein heavy chain DHC3 at subpellicular microtubules (SPMTs) in ookinetes in a DHC3-dependent manner, functioning as a receptor for SPMT-dynein-driven cargoes; genetic disruption of RAB11b phenocopies DHC3 deficiency, causing defective formation or localization of apical organelles and structures and impairing ookinete morphogenesis, shape, and gliding, leading to failure of mosquito infection. Co-immunoprecipitation (interaction with DHC3), conditional knockout/genetic disruption with defined phenotypic readouts (ookinete morphology, gliding motility, apical organelle assembly, mosquito infectivity) Nature communications Medium 39366980
2025 RAB11b co-immunoprecipitates with PfSKP1 (a component of the Cullin-RING-Ligase SCF complex) and with PfFBXO1 in schizont-stage P. falciparum parasites, placing RAB11b in physical association with the PfSCF ubiquitin ligase complex; IMC-associated proteins and Rab11b are enriched together in these pull-downs, suggesting a link between ubiquitin-mediated regulation and IMC biogenesis. Co-immunoprecipitation followed by LC-MS/MS from schizont-stage transgenic parasites expressing HA-tagged PfSKP1 and PfFBXO1 Scientific reports Low 40592953
2020 PbRAB11b protein is expressed during the zygote-to-ookinete transition in P. berghei, as shown by western blot and immunofluorescence; its expression pattern was assessed in parasites with reduced PbRAB11A expression, establishing it as a distinct, co-expressed family member at this stage. Western blot and immunofluorescence of endogenous PbRAB11b across the time course of zygote-to-ookinete transition PLoS pathogens Low 32463831
2022 RAB11b (PY17X_1359500 ortholog) localizes to the inner membrane complex (IMC) in P. yoelii schizonts, as confirmed by immunofluorescence assay with anti-HA antibody co-stained with anti-GAP45, following episomal N-terminal HA-tagging. Immunofluorescence assay (IFA) with epitope-tagged protein co-stained with IMC marker GAP45 in schizont-stage P. yoelii eLife Low 35775739
2020 RAB11b co-immunoprecipitates with K13 (the artemisinin resistance kelch protein) in P. falciparum intra-erythrocytic parasites, identifying RAB11b as part of the K13-associated protein network involved in vesicular trafficking. Immunoprecipitation with K13-specific monoclonal antibodies followed by mass spectrometry in gene-edited P. falciparum lines PLoS pathogens Low 32310999
2003 RAB11b (PfRab11B) is one of 11 Rab GTPase family members in P. falciparum; the gene is transcribed in infected erythrocytes, as demonstrated by RT-PCR/transcriptional analysis. Bioinformatic identification combined with experimental transcription testing (RT-PCR) in P. falciparum-infected erythrocytes Gene Low 12657463

Source papers

Stage 0 corpus · 15 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2003 The Plasmodium falciparum family of Rab GTPases. Gene 74 12657463
2024 A subpellicular microtubule dynein transport machinery regulates ookinete morphogenesis for mosquito transmission of Plasmodium yoelii. Nature communications 6 39366980
2025 PfFBXO1 is essential for inner membrane complex formation in Plasmodium falciparum during both asexual and transmission stages. Communications biology 0 39915671
2025 Functional characterisation of components in two Plasmodium falciparum Cullin-RING-Ligase complexes. Scientific reports 0 40592953
2022 Inner membrane complex proteomics reveals a palmitoylation regulation critical for intraerythrocytic development of malaria parasite. eLife 0 35775739
2021 The apicoplast link to fever-survival and artemisinin-resistance in the malaria parasite. Nature communications 0 34315897
2020 Insights into the intracellular localization, protein associations and artemisinin resistance properties of Plasmodium falciparum K13. PLoS pathogens 0 32310999
2020 Zygote morphogenesis but not the establishment of cell polarity in Plasmodium berghei is controlled by the small GTPase, RAB11A. PLoS pathogens 0 32463831
2020 The ZIP Code of Vesicle Trafficking in Apicomplexa: SEC1/Munc18 and SNARE Proteins. mBio 0 33082261
2018 Apicomplexa Cell Cycles: Something Old, Borrowed, Lost, and New. Trends in parasitology 0 30078701
2016 An essential malaria protein defines the architecture of blood-stage and transmission-stage parasites. Nature communications 0 27121004
2014 The inner membrane complex through development of Toxoplasma gondii and Plasmodium. Cellular microbiology 0 24612102
2011 Construction of a Plasmodium falciparum Rab-interactome identifies CK1 and PKA as Rab-effector kinases in malaria parasites. Biology of the cell 0 22188458
2009 Rab11A-controlled assembly of the inner membrane complex is required for completion of apicomplexan cytokinesis. PLoS pathogens 0 19165333
2008 Comparative genomics of the Rab protein family in Apicomplexan parasites. Microbes and infection 0 18468471