Affinage · Plasmodium

PF3D7_1330600

elongation factor Tu, putative

Annotated
2026-09-08
7 papers in source corpus 3 papers cited in narrative 6 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_1330600 (tufA) encodes the apicoplast-encoded elongation factor Tu (EF-Tu) of Plasmodium falciparum, a translationally active component of the organellar protein synthesis machinery whose product is localized within the apicoplast and maximally expressed in the trophozoite stage (PMID:15773980). As a canonical translation GTPase, recombinant PfEF-Tu hydrolyses GTP and undergoes nucleotide exchange (GDP release) mediated by the nuclear-encoded PfEF-Ts, with which it forms a functional complex (PMID:21163263). Beyond its translational role, PfEF-Tu displays an additional chaperone-related disulphide reductase activity, offering a rationale for retention of tufA on the plastid genome (PMID:21163263). The protein is a validated antimalarial target: it is directly bound and inhibited by structurally distinct EF-Tu antibiotics kirromycin, GE2270A, and enacyloxin IIa in vitro (PMID:10505418, PMID:21163263), and its levels are depleted by thiostrepton, which targets apicoplast translation (PMID:15773980).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 1999 Medium

    The first question was whether the apicoplast EF-Tu is a genuine drug target — reconstitution with recombinant protein showed it directly engages multiple classes of EF-Tu antibiotics that also kill parasites, establishing apicoplast translation as an antimalarial vulnerability.

    Evidence In vitro complex-formation assays with recombinant EF-Tu(pl) and kirromycin, GE2270A, enacyloxin IIa, plus blood-culture antimalarial assays

    PMID:10505418

    Open questions at the time
    • In vitro binding does not demonstrate that drug killing in culture proceeds through EF-Tu specifically
    • No enzymatic readout of inhibition at this stage
    • No structural mapping of the distinct binding sites
  2. 2005 Medium

    It was unknown whether the plastid tufA gene is actually expressed as protein and where — localization and stage-specific analysis showed EF-Tu is produced and resides in the apicoplast with peak trophozoite expression, confirming an active organellar translation apparatus.

    Evidence Protein localization by immunofluorescence/fractionation and stage-specific expression analysis in P. falciparum

    PMID:15773980

    Open questions at the time
    • Does not define the full set of translation partners in the organelle
    • Stage-specific regulation mechanism not addressed
  3. 2005 Medium

    To link a known antibiotic to apicoplast translation, thiostrepton treatment was shown to reduce EF-Tu protein levels, providing cellular evidence that this drug acts at the site of apicoplast protein synthesis.

    Evidence Drug treatment followed by western-blot quantification of EF-Tu protein levels in P. falciparum

    PMID:15773980

    Open questions at the time
    • Protein-level reduction does not distinguish direct from downstream effects on EF-Tu
    • Thiostrepton targets LSU rRNA, not EF-Tu itself
  4. 2010 High

    The catalytic and partner biochemistry was resolved — reconstituted PfEF-Tu hydrolyses GTP, physically interacts with nuclear-encoded PfEF-Ts, and undergoes PfEF-Ts-mediated GDP release, establishing a functional EF-Tu/EF-Ts nucleotide-exchange cycle across the two genomes.

    Evidence Recombinant GTPase, nucleotide-exchange, and Co-IP/pulldown assays plus homology modeling of the PfEF-Tu:PfEF-Ts complex

    PMID:21163263

    Open questions at the time
    • Interaction with the ternary complex (aminoacyl-tRNA) not directly demonstrated
    • Complex geometry rests on homology modeling, not an experimental structure
  5. 2010 Medium

    The antibiotic-target link was closed at the enzymatic level — kirromycin was shown to inhibit PfEF-Tu GTPase/translation activity in vitro, confirming EF-Tu as the direct molecular target rather than a bystander.

    Evidence In vitro enzymatic inhibition assay with recombinant PfEF-Tu and kirromycin

    PMID:21163263

    Open questions at the time
    • Enzymatic inhibition not yet tied to a defined resistance mutation in the parasite
    • Only kirromycin tested enzymatically among the inhibitor panel
  6. 2010 Medium

    A moonlighting activity was uncovered — recombinant PfEF-Tu exhibits chaperone-related disulphide reductase activity, offering a functional explanation for why tufA is retained on the plastid genome.

    Evidence In vitro disulphide reductase biochemical assay with recombinant PfEF-Tu

    PMID:21163263

    Open questions at the time
    • Physiological substrates of the reductase activity not identified
    • In vivo relevance of this activity not tested

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether PfEF-Tu is genetically essential, how its stage-regulated expression is controlled, and the in vivo role and substrates of its disulphide reductase activity remain unresolved.
  • No genetic knockout/knockdown of tufA in the corpus
  • No experimental structure of PfEF-Tu or its complexes
  • Resistance-conferring mutations to the antibiotic inhibitors not mapped

Mechanism profile

Synthesis pass · controlled-vocabulary classification

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2005 The tufA gene encoded by the P. falciparum apicoplast genome is translationally active; its protein product EF-Tu was detected and localized within the apicoplast organelle, with maximal expression in the trophozoite stage of the intraerythrocytic cycle. Protein localization (immunofluorescence/fractionation), stage-specific expression analysis Molecular microbiology Medium 15773980
2005 The drug thiostrepton, which binds the apicoplast LSU rRNA, reduced P. falciparum apicoplast EF-Tu (tufA) protein levels, providing evidence that apicoplast translation is the site of action of this drug. Drug treatment followed by western blot quantification of EF-Tu protein levels Molecular microbiology Medium 15773980
1999 Recombinant P. falciparum apicoplast EF-Tu (EF-Tu(pl)) forms demonstrable complexes in vitro with the EF-Tu inhibitors kirromycin, GE2270A, and enacyloxin IIa, which bind to different sites on EF-Tu; these inhibitors show antimalarial activity in blood cultures. In vitro complex formation assay with recombinant protein and structurally distinct antibiotic inhibitors; blood culture antimalarial assay Protist Medium 10505418
2010 Recombinant P. falciparum apicoplast EF-Tu (PfEF-Tu, encoded by tufA) hydrolyses GTP and interacts with the nuclear-encoded elongation factor PfEF-Ts; PfEF-Ts mediates nucleotide exchange on PfEF-Tu (GDP release), as shown by in vitro assays and homology modeling of the PfEF-Tu:PfEF-Ts complex. Recombinant protein production, GTPase assay, in vitro nucleotide exchange assay, Co-IP/pulldown interaction assay, homology modeling International journal for parasitology High 21163263
2010 The EF-Tu inhibitor kirromycin affects PfEF-Tu GTPase/translation activity in vitro, confirming apicoplast EF-Tu as the molecular target of this drug in P. falciparum. In vitro enzymatic inhibition assay with recombinant PfEF-Tu and kirromycin International journal for parasitology Medium 21163263
2010 P. falciparum apicoplast EF-Tu (PfEF-Tu) possesses chaperone-related disulphide reductase activity, providing a functional rationale for retention of the tufA gene on the plastid genome. In vitro biochemical assay for disulphide reductase activity using recombinant PfEF-Tu International journal for parasitology Medium 21163263

Source papers

Stage 0 corpus · 7 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2005 A monkey's tale: the origin of Plasmodium vivax as a human malaria parasite. Proceedings of the National Academy of Sciences of the United States of America 158 15684081
2011 Protein translation in Plasmodium parasites. Trends in parasitology 74 21741312
2005 The apicoplast of Plasmodium falciparum is translationally active. Molecular microbiology 59 15773980
1999 Antibiotic inhibitors of organellar protein synthesis in Plasmodium falciparum. Protist 56 10505418
2010 Phylogeny of Asian primate malaria parasites inferred from apicoplast genome-encoded genes with special emphasis on the positions of Plasmodium vivax and P. fragile. Gene 17 19818838
2010 Interaction of apicoplast-encoded elongation factor (EF) EF-Tu with nuclear-encoded EF-Ts mediates translation in the Plasmodiumfalciparum plastid. International journal for parasitology 17 21163263
2007 Analysis of elongation factor Tu (tuf A) of apicoplast from Indian Plasmodium vivax isolates. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 8 17602895