Affinage · Plasmodium

PF3D7_1320800

dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex

Audit flag: identity unverified
Annotated
2026-09-08
2 papers in source corpus 2 papers cited in narrative 3 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_1320800 encodes KDH-E2, the dihydrolipoyllysine-residue succinyltransferase (E2) subunit of the α-ketoglutarate dehydrogenase (KDH) complex, which localizes to the mitochondrion of P. falciparum (PMID:25116855). Catalytic competence of KDH-E2 depends on post-translational lipoylation, which proceeds through a novel two-enzyme mechanism requiring both LipL1 and LipL2 acting together — LipL1 alone is insufficient — and occurs exclusively under strongly reducing conditions, distinguishing it from H-protein lipoylation (PMID:25116855). As the E2 component of KDH, PF3D7_1320800 contributes to a mitochondrial ketoacid dehydrogenase system that, together with the branched-chain ketoacid dehydrogenase (BCDH), supports mitochondrial acetyl-CoA biosynthesis required for histone acetylation and parasite survival, with KDH and BCDH in a synthetic-lethal relationship (PMID:37068227). Beyond its mitochondrial localization, its lipoylation requirements, and its role as a component of this essential complex, no further subunit-specific mechanistic detail for PF3D7_1320800 has been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2014 Medium

    Establishing where the KDH E2 subunit acts was prerequisite to placing PF3D7_1320800 in parasite metabolism; localization pinned it to the mitochondrion.

    Evidence Subcellular localization/fluorescence imaging of the KDH E2 subunit in P. falciparum

    PMID:25116855

    Open questions at the time
    • Functional consequence of localization not independently replicated
    • Does not resolve KDH-E2 activity or complex assembly in vivo
  2. 2014 High

    It was unknown how KDH-E2 acquires the lipoyl cofactor needed for catalysis; dissection showed lipoylation requires LipL1 and LipL2 together under strongly reducing conditions, defining a novel two-enzyme mechanism distinct from H-protein lipoylation.

    Evidence In vitro lipoylation assay under defined redox conditions with genetic/biochemical dissection of LipL1 and LipL2 contributions

    PMID:25116855

    Open questions at the time
    • Physiological trigger for the strongly reducing requirement in vivo not defined
    • Structural basis for the LipL1/LipL2 cooperation not resolved
  3. 2023 Medium

    The downstream metabolic role of the KDH complex was clarified: KDH and BCDH form a synthetic-lethal pair whose LipL2-dependent activity feeds mitochondrial acetyl-CoA production required for histone acetylation and survival.

    Evidence Metabolite-labeling with genetic deletion lines and synthetic lethality analysis in P. falciparum

    PMID:37068227

    Open questions at the time
    • Effects attributed to the complex rather than to PF3D7_1320800 in isolation
    • Individual contribution of KDH-E2 versus other KDH subunits to acetyl-CoA output not separated

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether PF3D7_1320800 has subunit-specific functions or interaction properties beyond its role in the KDH complex remains unresolved.
  • No subunit-resolved genetic knockout phenotype for PF3D7_1320800 alone
  • No structural or reciprocal interaction data isolating KDH-E2 within the complex

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
alpha-ketoglutarate dehydrogenase (KDH) complex

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2014 The E2 subunit of α-ketoglutarate dehydrogenase (KDH), corresponding to PF3D7_1320800 (dihydrolipoyllysine-residue succinyltransferase / KDH-E2), localizes to the mitochondrion of P. falciparum, as demonstrated by direct localization experiments. Subcellular localization experiment (live imaging / fluorescence microscopy) of the KDH E2 subunit in P. falciparum Molecular microbiology Medium 25116855
2014 Lipoylation of the KDH E2 subunit (PF3D7_1320800) requires both LipL1 and LipL2 acting together through a novel two-enzyme mechanism; LipL1 alone cannot lipoylate KDH-E2, and this lipoylation occurs exclusively under strongly reducing conditions, distinguishing it from H-protein lipoylation. In vitro lipoylation assay under defined redox conditions; genetic/biochemical dissection of LipL1 and LipL2 contributions Molecular microbiology High 25116855
2023 The KDH complex (which includes PF3D7_1320800 as its E2 subunit) is one of two main mitochondrial ketoacid dehydrogenase enzymes whose activity depends on LipL2-mediated lipoate attachment; genetic deletion of KDH activity participates in a synthetic lethal relationship with the other ketoacid dehydrogenase (BCDH), and together they are required for mitochondrial acetyl-CoA biosynthesis essential for histone acetylation and parasite survival. Metabolite-labeling experiments with genetic deletion lines affecting mitochondrial dehydrogenase activity; synthetic lethality analysis Proceedings of the National Academy of Sciences of the United States of America Medium 37068227

Source papers

Stage 0 corpus · 2 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Redox-dependent lipoylation of mitochondrial proteins in Plasmodium falciparum. Molecular microbiology 19 25116855
2023 The mitochondrion of Plasmodium falciparum is required for cellular acetyl-CoA metabolism and protein acetylation. Proceedings of the National Academy of Sciences of the United States of America 13 37068227