Affinage · Plasmodium

STX16

PF3D7_1243000 · syntaxin-16, putative

Annotated
2026-09-08
3 papers in source corpus 2 papers cited in narrative 2 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_1243000 (STX16) is a predicted syntaxin-family SNARE protein of Plasmodium falciparum, identified computationally as one of 18 SNARE-like proteins in the parasite genome and assigned to a P. falciparum-specific syntaxin-like subfamily (PMID:17240462). Functional analysis of the VPS45-SNARE axis in apicomplexan parasites has implicated STX16, alongside TgVps45 and Stx6, in biogenesis of the inner membrane complex (alveoli) (PMID:33082261). Beyond this membership in a putative VPS45-SNARE trafficking axis, no dedicated experiment has directly established the subcellular localization, binding partners, or molecular mechanism of PF3D7_1243000 itself in the available corpus; the primary mechanistic detail rests on the co-analyzed proteins TgVps45 and Stx6 rather than on STX16 directly.

Mechanistic history

Synthesis pass · year-by-year structured walk · 2 steps
  1. 2006 Low

    Before any parasite SNARE inventory existed, it was unknown which membrane-fusion machinery P. falciparum encodes; a genome-wide survey placed PF3D7_1243000 within the SNARE repertoire and defined it as a syntaxin-like protein.

    Evidence Bioinformatics/phylogenetic analysis of the P. falciparum genome, with GFP-tagging performed for other family members but not STX16

    PMID:17240462

    Open questions at the time
    • Computational identification only; no direct experiment on PF3D7_1243000
    • No subcellular localization determined for STX16
    • No binding partners or functional assay for STX16
  2. 2020 Low

    Whether STX16 participates in a specific trafficking pathway was unresolved; functional study of the VPS45-SNARE axis implicated STX16 together with TgVps45 and Stx6 in inner membrane complex (alveoli) biogenesis, placing it in a candidate trafficking role.

    Evidence Genetic/functional analysis of SNARE and SEC1/Munc18 proteins in Toxoplasma gondii and P. falciparum, including localization and loss-of-function experiments

    PMID:33082261

    Open questions at the time
    • No dedicated experiment isolated STX16 function; mechanistic detail is attributed to TgVps45/Stx6
    • STX16 localization not directly established
    • Direct binding partners of STX16 not defined

Open questions

Synthesis pass · forward-looking unresolved questions
  • The precise molecular mechanism, subcellular localization, and direct binding partners of PF3D7_1243000 remain uncharacterized by any dedicated experiment.
  • No direct localization of STX16 protein
  • No reconstituted SNARE complex or partner validation for STX16
  • No loss-of-function phenotype isolating STX16 specifically

Mechanism profile

Synthesis pass · controlled-vocabulary classification
No controlled-vocabulary terms were assigned to this entry.

Evidence

Reading pass · 2 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2020 In Plasmodium falciparum, STX16 (Stx16/PF3D7_1243000) was implicated in biogenesis of the inner membrane complex (alveoli), likely acting in a coordinated manner with TgVps45 and Stx6; this role was established through functional studies of the VPS45-SNARE axis in both Toxoplasma gondii and P. falciparum. Genetic/functional analysis of SNARE and SEC1/Munc18 proteins in apicomplexan parasites, including localization and loss-of-function experiments mBio Low 33082261
2006 PF3D7_1243000 (STX16) was identified as one of 18 SNARE-like proteins in the P. falciparum genome through bioinformatics analysis; it was classified within a P. falciparum-specific syntaxin-like subfamily. No subcellular localization or functional experiment was performed specifically on STX16 in this study. Bioinformatics/phylogenetic analysis of the P. falciparum genome; GFP-tagging and subcellular localization performed for other family members (PfSyn5p, PfSec22p) but not STX16 Molecular and biochemical parasitology Low 17240462

Source papers

Stage 0 corpus · 3 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2006 Identification of Plasmodium falciparum family of SNAREs. Molecular and biochemical parasitology 38 17240462
2020 The ZIP Code of Vesicle Trafficking in Apicomplexa: SEC1/Munc18 and SNARE Proteins. mBio 33 33082261
2008 Plasmodium falciparum secretory pathway: characterization of PfStx1, a plasma membrane Qa-SNARE. Molecular and biochemical parasitology 7 19103232