Affinage · Plasmodium

VP2

PF3D7_1235200 · V-type K+-independent H+-translocating inorganic pyrophosphatase

Annotated
2026-09-08
7 papers in source corpus 4 papers cited in narrative 4 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

VP2 (PF3D7_1235200) is a type II, K⁺-independent V-type H⁺-translocating inorganic pyrophosphatase of Plasmodium falciparum, cloned and assigned to this biochemical class by sequence and phylogenetic analysis that distinguished it from the K⁺-dependent type I enzyme PfVP1 (PMID:11378198). It is dispensable for the intraerythrocytic stage: clean double-crossover disruption yields viable blood-stage parasites (PMID:21251930). Beyond its predicted role in pyrophosphate hydrolysis coupled to proton pumping, direct mechanistic characterization of the VP2 protein itself is limited in the available corpus; a preprint places it at parasite subcellular membranes acting as a proton pump within pyrophosphate homeostasis alongside PfVP1 (PMID:40027813). In P. berghei, elevated transcript levels of the VP2 ortholog accompany piperaquine and lumefantrine resistance, an association that has not been extended to a demonstrated functional role for the protein (PMID:25448357).

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2001 Medium

    Establishing that P. falciparum encodes a second, biochemically distinct pyrophosphatase answered whether the parasite's PPi-driven proton pumping was carried by a single enzyme, defining VP2 as a type II (K⁺-independent) counterpart to the K⁺-dependent PfVP1.

    Evidence Gene cloning, sequence analysis, and phylogenetic comparison in P. falciparum

    PMID:11378198

    Open questions at the time
    • K⁺-independence and pyrophosphatase/proton-pump activity were inferred from sequence similarity to plant AVP2, not directly assayed for VP2
    • no biochemical reconstitution of VP2 enzymatic activity
    • subcellular localization not determined at this stage
  2. 2011 High

    Determining whether VP2 is required for blood-stage growth showed the gene is not essential in erythrocytic parasites, constraining its physiological importance in that stage.

    Evidence Double-crossover gene disruption with yDHODH positive and yCD-UPRT negative selection in P. falciparum blood stages

    PMID:21251930

    Open questions at the time
    • does not address a role in non-erythrocytic (mosquito or liver) stages
    • does not reveal what function VP2 serves when present
    • possible functional redundancy with PfVP1 not directly tested
  3. 2014 Low

    Testing whether VP2 expression tracks with antimalarial resistance revealed elevated ortholog transcript levels in resistant lines, raising but not resolving a possible role in drug resistance.

    Evidence mRNA transcript quantification in piperaquine- and lumefantrine-resistant P. berghei ANKA lines selected in vivo

    PMID:25448357

    Open questions at the time
    • association only; no functional test of VP2 protein activity in resistance
    • shown in P. berghei ortholog, not in P. falciparum VP2
    • proposed link to digestive-vacuole proton gradients not experimentally demonstrated
  4. 2025 Low

    Assigning subcellular localization and proton-pump function positioned VP2 at parasite membranes within pyrophosphate homeostasis alongside PfVP1.

    Evidence Reverse genetics and biochemical approaches in P. falciparum (preprint)

    PMID:40027813

    Open questions at the time
    • preprint provides no granular experimental detail specific to VP2
    • the study's primary focus is on soluble pyrophosphatases, not VP2
    • direct measurement of VP2 proton-pumping activity not reported

Open questions

Synthesis pass · forward-looking unresolved questions
  • It remains unknown what physiological role VP2 serves given its dispensability, and whether its predicted K⁺-independent pyrophosphatase/proton-pump activity is directly demonstrable and mechanistically linked to antimalarial drug resistance.
  • no direct biochemical assay of VP2 pyrophosphatase or proton-pump activity
  • no functional demonstration of a resistance role for VP2 itself
  • stage-specific and redundancy relationships with PfVP1 uncharacterized

Mechanism profile

Synthesis pass · controlled-vocabulary classification

Evidence

Reading pass · 4 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2001 VP2 (PfVP2) was identified and cloned from P. falciparum and inferred to encode a type II (K⁺-independent) V-type H⁺-translocating inorganic pyrophosphatase, phylogenetically and functionally distinct from the type I (K⁺-dependent) PfVP1. Gene cloning, sequence analysis, and phylogenetic comparison Molecular and biochemical parasitology Medium 11378198
2011 VP2 (PfVP2, the type II vacuolar proton-pumping pyrophosphatase gene) was successfully disrupted by double crossover recombination in P. falciparum blood stage parasites, demonstrating that VP2 is not essential for the survival of erythrocytic stage parasites. Gene disruption by double crossover recombination using the pUF-1 transfection vector with yDHODH positive selection and yCD-UPRT negative selection Molecular and biochemical parasitology High 21251930
2025 VP2 (PfVP2) localizes to the parasite's subcellular membranes and functions as a proton pump in P. falciparum, where it hydrolyzes pyrophosphate as part of the parasite's pyrophosphate homeostasis machinery alongside PfVP1. Reverse genetics and biochemical approaches (specific subcellular localization details attributed to PfVP2 described in the context of the broader study) bioRxivpreprint Low 40027813
2014 In P. berghei, elevated mRNA transcript levels of vp2 (the VP2 ortholog) were associated with piperaquine and lumefantrine resistance, suggesting VP2 may contribute to drug resistance mechanisms, possibly by modulating proton gradients in the digestive vacuole. mRNA transcript quantification in drug-resistant P. berghei lines selected in vivo Experimental parasitology Low 25448357

Source papers

Stage 0 corpus · 7 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2005 The 'permeome' of the malaria parasite: an overview of the membrane transport proteins of Plasmodium falciparum. Genome biology 146 15774027
2011 Yeast dihydroorotate dehydrogenase as a new selectable marker for Plasmodium falciparum transfection. Molecular and biochemical parasitology 88 21251930
2000 AVP2, a sequence-divergent, K(+)-insensitive H(+)-translocating inorganic pyrophosphatase from Arabidopsis. Plant physiology 78 10806252
2001 Two classes of plant-like vacuolar-type H(+)-pyrophosphatases in malaria parasites. Molecular and biochemical parasitology 69 11378198
2014 Single nucleotide polymorphisms in Plasmodium falciparum V type H(+) pyrophosphatase gene (pfvp2) and their associations with pfcrt and pfmdr1 polymorphisms. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 6 24657918
2014 Piperaquine and Lumefantrine resistance in Plasmodium berghei ANKA associated with increased expression of Ca2+/H+ antiporter and glutathione associated enzymes. Experimental parasitology 5 25448357
2025 Maintenance of pyrophosphate homeostasis in multiple subcellular compartments is essential in Plasmodium falciparum. bioRxiv : the preprint server for biology 0 40027813