Affinage · Plasmodium

ATP2

PF3D7_1219600 · phospholipid-transporting ATPase 2

Annotated
2026-09-08
7 papers in source corpus 6 papers cited in narrative 6 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_1219600 (ATP2) is a P-type ATPase of P. falciparum expressed during the intraerythrocytic cycle and required in the late stages of asexual development (PMID:7851389). Biochemical reconstitution of the P. chabaudi ortholog establishes ATP2 as a lipid-stimulated P4-ATPase (flippase): purified in complex with a Plasmodium Cdc50 subunit, its ATPase activity is stimulated by phosphatidylserine or phosphatidylethanolamine and further upregulated by phosphatidylinositol 4-phosphate (PMID:33372863). In P. falciparum blood stages ATP2 localizes to the parasite plasma membrane and drives ATP-dependent internalization of a phosphatidylserine analogue (NBD-PS), with overexpression increasing and knockdown reducing uptake — defining ATP2 as a major phosphatidylserine flipping mechanism at the parasite surface (PMID:41144577). ATP2 associates with the chaperone CDC50C, whose conditional disruption is essential for trophozoite maturation, and the CDC50C–ATP2 complex influences endocytosis of host hemoglobin and hemozoin formation (PMID:35862778). ATP2 expression level modulates parasite sensitivity to several antimalarial compounds, and its copy number amplification is selected under drug pressure, marking it as a candidate drug target or resistance determinant (PMID:41144577, PMID:39899599).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 1995 Low

    Established that ATP2 is a distinct P-type ATPase gene expressed in blood-stage parasites, providing the first sequence-level identification and a hint of a late-stage asexual requirement.

    Evidence Molecular cloning, sequencing, and phylogenetic/expression analysis in P. falciparum

    PMID:7851389

    Open questions at the time
    • No biochemical activity assay to define substrate or transport function
    • Late-stage requirement inferred from expression, not from genetic perturbation
  2. 2021 High

    Resolved the biochemical identity of ATP2 as a lipid-stimulated P4-ATPase requiring a Cdc50 partner, moving it from a predicted ATPase to a functionally defined flippase.

    Evidence Recombinant expression and purification of the PcATP2/PcCdc50B complex with in vitro ATPase assays using defined lipids (P. chabaudi)

    PMID:33372863

    Open questions at the time
    • Direct demonstration of lipid translocation (as opposed to lipid-stimulated ATP hydrolysis) not shown in this system
    • Performed on the P. chabaudi ortholog, not P. falciparum ATP2
  3. 2022 Medium

    Identified CDC50C as the P. falciparum ATP2 binding partner and linked the complex to trophozoite maturation and hemoglobin endocytosis, connecting flippase activity to a specific cellular process.

    Evidence Co-immunoprecipitation and DiCre conditional disruption with phenotypic analysis of hemoglobin endocytosis and hemozoin formation in P. falciparum

    PMID:35862778

    Open questions at the time
    • Essentiality shown for CDC50C disruption; direct ATP2 loss-of-function phenotype not established here
    • Mechanistic link between lipid flipping and endocytosis not resolved
  4. 2022 Low

    Proposed structural determinants of ATP2 lipid recognition, including a candidate phosphatidylinositol allosteric site consistent with the PI4P stimulation seen biochemically.

    Evidence Coarse-grained molecular dynamics simulation of PcATP2 in a heterogeneous membrane (P. chabaudi ortholog)

    PMID:35877905

    Open questions at the time
    • Computational prediction with no experimental validation of the proposed binding site or residues
    • Based on the P. chabaudi ortholog
  5. 2025 High

    Demonstrated in P. falciparum that ATP2 sits at the plasma membrane and functions as a major phosphatidylserine internalization mechanism, and that its expression level tunes sensitivity to specific antimalarial compounds independently of parasite pH.

    Evidence Fluorescence localization, reciprocal overexpression/knockdown, NBD-PS uptake assays, drug sensitivity and cytosolic pH measurements in P. falciparum

    PMID:41144577

    Open questions at the time
    • Whether the tested compounds directly inhibit ATP2 catalysis versus acting through an ATP2-dependent pathway is not resolved
    • Directionality and full lipid substrate range at the P. falciparum surface not exhaustively defined
  6. 2025 Medium

    Genetic evidence from resistance selection implicated ATP2 as a drug target or resistance determinant, reinforcing its therapeutic relevance.

    Evidence In vitro resistance evolution with compound 22, whole-genome sequencing, copy-number analysis, and validation with pre-existing pfatp2-amplified lines in P. falciparum 3D7

    PMID:39899599

    Open questions at the time
    • Copy number amplification is indirect evidence for target engagement; direct binding/inhibition not shown
    • Whether amplification confers resistance through overexpression alone is not fully dissected

Open questions

Synthesis pass · forward-looking unresolved questions
  • How ATP2-mediated phosphatidylserine flipping mechanistically drives hemoglobin endocytosis and trophozoite maturation, and whether antimalarial compounds engage ATP2 directly, remain open.
  • No structural model validated experimentally for P. falciparum ATP2
  • Causal link between flippase activity and endocytosis unestablished
  • Direct compound–ATP2 binding not demonstrated

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
ATP2–CDC50C complex (P. falciparum)PcATP2–PcCdc50B / PcATP2–PcCdc50A complex (P. chabaudi)

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1995 ATP2 (PfATPase2) is a P-type ATPase gene expressed during the intraerythrocytic life cycle of P. falciparum and appears to be required in the late stages of asexual development. Its full-length nucleotide and derived amino acid sequence were determined, and phylogenetic analysis showed it is remote from prokaryotic and mammalian P-type ATPases but shares features with a putative membrane-spanning Ca2+ ATPase involved in ribosome function in yeast. Molecular cloning, nucleotide sequencing, and phylogenetic analysis; expression analysis during intraerythrocytic stages European journal of biochemistry Low 7851389
2021 Recombinantly produced P. chabaudi ATP2 (PcATP2) associates with two Plasmodium-encoded Cdc50 proteins, PcCdc50B and PcCdc50A. The purified PcATP2/PcCdc50B complex displays ATPase activity stimulated by phosphatidylserine or phosphatidylethanolamine, and this activity is further upregulated by phosphatidylinositol 4-phosphate, demonstrating that ATP2 is a lipid-stimulated P4-ATPase (flippase). Recombinant protein expression, protein complex purification, in vitro ATPase activity assay with defined lipid substrates Emerging microbes & infections High 33372863
2022 CDC50C is a binding partner of ATP2 in P. falciparum blood stages. Conditional disruption of CDC50C is essential for trophozoite maturation. The CDC50C-ATP2 complex influences parasite endocytosis of host cell hemoglobin and consequently hemozoin formation. Gene tagging, conditional gene disruption (DiCre-based), co-immunoprecipitation to identify CDC50C as ATP2 binding partner, phenotypic analysis of hemoglobin endocytosis and hemozoin formation mBio Medium 35862778
2022 Coarse-grained molecular dynamics simulations of PcATP2 (P. chabaudi ortholog of P. falciparum ATP2) embedded in a heterogeneous lipid membrane identified structural features of the lipid fingerprint of ATP2, including a potential phosphatidylinositol allosteric binding site and evolutionary conserved residues that may stabilize lipids in the binding pocket. Coarse-grained molecular dynamics (CG-MD) simulation Membranes Low 35877905
2025 In P. falciparum, ATP2 (PfATP2) localizes to the parasite plasma membrane surface and is important for parasite growth. Parasites engineered to overexpress PfATP2 show reduced sensitivity to compounds MMV665794, MMV007224, and MMV665852, while PfATP2 knockdown renders parasites hypersensitive to the same compounds. PfATP2 overexpression increases the rate of internalization of a fluorescent phosphatidylserine analogue (NBD-PS), and knockdown reduces NBD-PS uptake, consistent with PfATP2 functioning as a major ATP-dependent phosphatidylserine internalisation (flipping) mechanism on the parasite plasma membrane. PfATP2 expression level does not affect cytosolic pH or the ability of these compounds to dysregulate parasite pH. Fluorescence microscopy for localization; conditional overexpression and knockdown (inducible systems); drug sensitivity assays; fluorescent lipid analogue (NBD-PS) uptake assay; cytosolic pH measurement PLoS pathogens High 41144577
2025 In vitro resistance selection in P. falciparum with compound 22 (a quinoxaline-based antimalarial) yielded copy number amplification of pfatp2, implicating ATP2 as a potential drug target or resistance determinant. Pre-existing P. falciparum lines with pfatp2 copy number variations showed reduced susceptibility to compound 22 and related analogues. In vitro evolution/resistance selection, whole-genome sequencing, copy number variation analysis, drug susceptibility assays on lines with pre-existing pfatp2 amplification PLoS pathogens Medium 39899599

Source papers

Stage 0 corpus · 7 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1995 Molecular cloning and sequence of two novel P-type adenosinetriphosphatases from Plasmodium falciparum. European journal of biochemistry 33 7851389
2022 CDC50 Orthologues in Plasmodium falciparum Have Distinct Roles in Merozoite Egress and Trophozoite Maturation. mBio 16 35862778
2021 ATP2, The essential P4-ATPase of malaria parasites, catalyzes lipid-stimulated ATP hydrolysis in complex with a Cdc50 β-subunit. Emerging microbes & infections 13 33372863
2022 In Silico Assessment of the Lipid Fingerprint Signature of ATP2, the Essential P4-ATPase of Malaria Parasites. Membranes 3 35877905
2025 Quinoxaline-based anti-schistosomal compounds have potent anti-plasmodial activity. PLoS pathogens 2 39899599
2024 Quinoxaline-Based Anti-Schistosomal Compounds Have Potent Anti-Malarial Activity. bioRxiv : the preprint server for biology 1 38712185
2025 PfATP2 is a flippase on the Plasmodium falciparum surface that is important for growth and influences parasite sensitivity to antiplasmodial compounds. PLoS pathogens 0 41144577