Affinage · Plasmodium

PF3D7_1137400

regulator of chromosome condensation, putative

Audit flag: identity unverified
Annotated
2026-09-08
1 papers in source corpus 1 papers cited in narrative 4 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_1137400 (PfRCC-PIP) is an RCC1-motif-containing regulatory protein of Plasmodium falciparum that functions as a scaffold coordinating phosphatase and kinase activity (PMID:30429842). It directly binds P. falciparum Protein Phosphatase type-1 (PfPP1) in vitro and co-exists in complex with PfPP1 in the parasite, establishing it as a major PfPP1 partner (PMID:30429842); in a Xenopus oocyte heterologous system it interacts with endogenous PP1 and synergizes with suboptimal progesterone to drive oocyte maturation, indicating it acts as a positive regulator of PP1 activity (PMID:30429842). Its RCC1-motif region additionally engages the parasite kinase CDPK7, extending its role to that of a kinase-anchoring protein and positioning it to couple phosphorylation with dephosphorylation (PMID:30429842). Attempts to generate knockout parasites failed, consistent with an essential function (PMID:30429842). Beyond these interactions and the failed-knockout result, no further mechanistic detail — including in situ localization, substrate specificity, or cell-cycle role — has been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2018 Medium

    Establishing that PF3D7_1137400 is a bona fide PfPP1 partner answered whether this RCC1-motif protein physically and functionally associates with the parasite's major phosphatase.

    Evidence In vitro direct interaction assay plus co-immunoprecipitation/complex detection in P. falciparum lysate

    PMID:30429842

    Open questions at the time
    • Does not define which region of PfPP1 or PfRCC-PIP mediates binding
    • No in situ demonstration of where in the parasite the complex forms
    • Stoichiometry and additional complex members unresolved
  2. 2018 Medium

    A heterologous functional assay resolved whether the interaction with PP1 is merely physical or regulatory, showing PF3D7_1137400 positively modulates PP1 activity.

    Evidence Xenopus oocyte maturation assay measuring synergy with suboptimal progesterone doses via endogenous PP1

    PMID:30429842

    Open questions at the time
    • Activation demonstrated on endogenous Xenopus PP1, not directly on PfPP1 in the parasite
    • Molecular mechanism of PP1 activation not defined
    • Physiological substrates dephosphorylated under this regulation unknown
  3. 2018 Low

    Identifying a kinase partner tested whether PF3D7_1137400 acts solely on the phosphatase side or bridges kinase and phosphatase activities, revealing a dual anchoring role.

    Evidence Pulldown/binding assay between the RCC1-motif region of PF3D7_1137400 and the kinase CDPK7

    PMID:30429842

    Open questions at the time
    • Single pulldown without reciprocal validation described
    • Whether CDPK7 and PfPP1 bind simultaneously or competitively is untested
    • Functional consequence of the CDPK7 interaction not measured
  4. 2018 Low

    Reverse genetics addressed whether the gene is dispensable, indicating essentiality for blood-stage survival.

    Evidence Attempted gene knockout in P. falciparum yielding no viable knockout parasites

    PMID:30429842

    Open questions at the time
    • Essentiality inferred from failure to obtain KO, not from conditional depletion or complementation
    • Stage-specific requirement not defined
    • No phenotype available to link essentiality to the PP1/CDPK7 functions

Open questions

Synthesis pass · forward-looking unresolved questions
  • How PF3D7_1137400 integrates PfPP1 and CDPK7 activity in situ, its substrates, and its cellular localization and cell-cycle role remain unknown.
  • No conditional knockdown/knockout phenotype characterized
  • No substrate or localization data
  • Simultaneous versus mutually exclusive binding of kinase and phosphatase untested

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
PfPP1-containing regulatory complex in P. falciparum

Evidence

Reading pass · 4 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2018 PF3D7_1137400 (PfRCC-PIP) directly interacts with P. falciparum Protein Phosphatase type-1 (PfPP1) in vitro and is present in complex with PfPP1 in the parasite, establishing it as a major binding partner and regulatory partner of PfPP1. In vitro interaction assay and co-immunoprecipitation/complex detection in parasite lysate Frontiers in microbiology Medium 30429842
2018 PF3D7_1137400 (PfRCC-PIP) interacts with endogenous PP1 in Xenopus oocytes and acts in synergy with suboptimal doses of progesterone to trigger oocyte maturation, indicating it exerts a regulatory (activating) effect on PP1 activity. Xenopus oocyte functional assay with progesterone dose–response Frontiers in microbiology Medium 30429842
2018 The RCC1-motif-containing region of PF3D7_1137400 (PfRCC-PIP) interacts with the parasite kinase CDPK7, identifying it as a kinase anchoring protein in addition to its phosphatase-anchoring role. Protein interaction assay (pulldown/binding assay with RCC1-motif region and CDPK7) Frontiers in microbiology Low 30429842
2018 Reverse genetic studies showed that no viable knock-out parasites of PF3D7_1137400 (PfRCC-PIP) could be obtained, suggesting the gene is essential for P. falciparum survival. Reverse genetics / attempted gene knockout Frontiers in microbiology Low 30429842

Source papers

Stage 0 corpus · 1 paper · ranked by NIH iCite citations
Year Title Journal Citations PMID
2018 Characterization of a Protein Phosphatase Type-1 and a Kinase Anchoring Protein in Plasmodium falciparum. Frontiers in microbiology 11 30429842