Affinage · Plasmodium

NOT1-G

PF3D7_1103800 · CCR4-NOT transcription complex subunit NOT1-G, putative

Annotated
2026-09-08
6 papers in source corpus 3 papers cited in narrative 3 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

NOT1-G (PF3D7_1103800) is a Plasmodium-specific scaffold subunit associated with the CAF1/CCR4/NOT complex that functions in the stage-specific control of translational repression during malaria parasite transmission (PMID:38352447, PMID:39777415). In P. yoelii female gametocytes, NOT1-G engages the DDX6-family helicase DOZI, and this interaction is a defining feature of the repressed state; upon fertilization, DOZI exchanges NOT1-G for the canonical NOT1 in the zygote, a compositional switch within the DOZI/CITH/ALBA complex that provides a mechanistic trigger for the global release of stored mRNAs from translational repression during the host-to-vector transition (PMID:38352447, PMID:39777415). Its membership in the PfCaf1-CCR4-NOT complex was first predicted bioinformatically in P. falciparum (PMID:26525978). Beyond this DOZI-dependent scaffold role in transmission-stage translational control, no direct enzymatic activity, substrate mRNA repertoire, or structural detail for NOT1-G has been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2015 Low

    Before any functional work, it was unknown whether NOT1-G belonged to the parasite CCR4-NOT machinery at all; comparative interactome analysis placed it within the PfCaf1-CCR4-NOT complex, establishing a candidate role in mRNA regulation.

    Evidence Bioinformatic comparative interactome analysis and protein-protein interaction network construction in P. falciparum

    PMID:26525978

    Open questions at the time
    • Computational prediction only, with no direct experimental validation of NOT1-G specifically
    • No demonstration of physical interaction or subcellular context
    • No stage-specific or functional assignment
  2. 2024 Medium

    It was unknown how repressed maternal mRNAs are released from translational silencing at fertilization; proximity proteomics showed DOZI interacts with NOT1-G in female gametocytes and swaps to canonical NOT1 in zygotes, providing a compositional-switch model for derepression during transmission.

    Evidence TurboID proximity proteomics across gametocyte and zygote stages, cross-validated by expansion and structured illumination microscopy in P. yoelii (preprint)

    PMID:38352447

    Open questions at the time
    • Preprint form at time of entry; proximity proteomics infers association, not direct binding
    • Does not identify which mRNAs are controlled by the NOT1-G-containing complex
    • Mechanism driving the NOT1-G-to-NOT1 exchange is not defined
  3. 2025 Medium

    The gametocyte-to-zygote exchange model was extended and quantified, confirming that DOZI shifts from NOT1-G to canonical NOT1 as part of a remodeling of the DOZI/CITH/ALBA complex consistent with a fertilization-triggered release of translational repression.

    Evidence TurboID proximity proteomics with quantitative DIA-MS comparing female gametocytes and zygotes, supported by comparative transcriptomics and proteomics in P. yoelii

    PMID:39777415

    Open questions at the time
    • Single-lab study relying on proximity labeling rather than direct structural/biochemical reconstitution
    • Functional consequence of removing NOT1-G on mRNA derepression not directly tested
    • Structural basis for DOZI selecting NOT1-G versus NOT1 unresolved

Open questions

Synthesis pass · forward-looking unresolved questions
  • The direct molecular activity of NOT1-G, its specific mRNA targets, and the structural basis for its stage-specific exchange with canonical NOT1 remain undetermined.
  • No defined biochemical or scaffolding activity for NOT1-G in isolation
  • No identified repressed transcript repertoire dependent on NOT1-G
  • No structural model of the DOZI–NOT1-G interaction or the exchange mechanism

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
CAF1/CCR4/NOT (PfCaf1-CCR4-NOT) complexDOZI/CITH/ALBA translational repression complex

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2024 In P. yoelii female gametocytes, DOZI (DDX6 orthologue) interacts with NOT1-G (PF3D7_1103800 orthologue), and upon fertilization (zygote stage) this interaction is replaced by an interaction between DOZI and the canonical NOT1, providing a mechanistic model for how mRNAs are released from translational repression during the host-to-vector transmission event. TurboID-based proximity proteomics across female gametocyte and zygote stages, cross-validated by ultrastructure expansion microscopy and structured illumination microscopy bioRxiv : the preprint server for biologypreprint Medium 38352447
2025 In P. yoelii female gametocytes, DOZI exchanges its interaction from NOT1-G (PF3D7_1103800 orthologue) to the canonical NOT1 in zygotes, as determined by TurboID-based proximity proteomics; this compositional switch in the DOZI/CITH/ALBA complex is consistent with a trigger for the release of mRNAs from translational repression upon fertilization. TurboID-based proximity proteomics (DIA-MS) comparing female gametocytes and zygotes; supported by comparative transcriptomics and proteomics PLoS pathogens Medium 39777415
2015 NOT1-G (PF3D7_1103800) was identified bioinformatically as a component of the PfCaf1-CCR4-NOT complex in P. falciparum through comparative interactome analysis using human and Plasmodium protein-protein interaction datasets. Bioinformatic/comparative interactome analysis; protein-protein interaction network construction using Cytoscape BMC genomics Low 26525978

Source papers

Stage 0 corpus · 6 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2015 A bioinformatic survey of RNA-binding proteins in Plasmodium. BMC genomics 62 26525978
2011 CCR4-associated factor 1 coordinates the expression of Plasmodium falciparum egress and invasion proteins. Eukaryotic cell 36 21803864
2019 Plasmodium male gametocyte development and transmission are critically regulated by the two putative deadenylases of the CAF1/CCR4/NOT complex. PLoS pathogens 30 30703164
2019 The molecular machinery of translational control in malaria parasites. Molecular microbiology 28 31531994
2025 Widespread release of translational repression across Plasmodium's host-to-vector transmission event. PLoS pathogens 10 39777415
2024 Global Release of Translational Repression Across Plasmodium's Host-to-Vector Transmission Event. bioRxiv : the preprint server for biology 2 38352447