Affinage · Plasmodium

RPL3

PF3D7_1027800 · 60S ribosomal protein L3

Annotated
2026-09-08
6 papers in source corpus 2 papers cited in narrative 2 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_1027800 (RPL3) is a structural constituent of the large (60S) subunit of the Plasmodium falciparum cytoplasmic 80S ribosome, resolved within the large-subunit architecture by cryo-EM of the intact ribosome and confirmed in native, actively translating elongation complexes imaged in situ by cryo-electron tomography inside infected erythrocytes (PMID:24913268, PMID:40825879). Beyond its membership in the 60S subunit as a component of the native translational machinery, no mechanistic role specific to RPL3 — enzymatic activity, post-translational modification, or a defined functional interaction partner — has been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 2 steps
  1. 2014 Medium

    Whether RPL3 is a bona fide constituent of the P. falciparum ribosome and where it sits was unknown until the intact 80S ribosome was resolved at near-atomic detail, placing RPL3 within the 60S subunit architecture.

    Evidence Cryo-EM structure of the P. falciparum 80S ribosome bound to emetine at 3.2 Å resolution

    PMID:24913268

    Open questions at the time
    • No functional experiment directed at RPL3 itself; role inferred solely from structural placement
    • No enzymatic activity, modification, or specific partner beyond the ribosome defined
    • Structure captured with a drug-bound ribosome, not a functional assay of RPL3
  2. 2025 Medium

    Whether RPL3 occupies the same structural position in ribosomes that are actively translating within the parasite was addressed by imaging native ribosomes in situ, confirming RPL3 as a large-subunit component of elongation-state complexes inside the cell.

    Evidence In situ cryo-electron tomography with atomic-resolution modelling of native ribosomes inside P. falciparum-infected human erythrocytes

    PMID:40825879

    Open questions at the time
    • RPL3 role inferred from its presence in solved large-subunit models, not from an RPL3-directed experiment
    • No mechanistic contribution of RPL3 to translation elongation demonstrated
    • No RPL3-specific interactions distinguished from bulk ribosome architecture

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether RPL3 has any function beyond structural membership in the 60S subunit — a distinct enzymatic activity, regulatory role, post-translational modification, or specific non-ribosomal partner — remains uncharacterized in the available corpus.
  • No functional or genetic assay targeting RPL3 in P. falciparum
  • No defined interaction partner specific to RPL3
  • No evidence for post-translational modification or regulatory activity of RPL3

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
P. falciparum cytoplasmic 80S ribosome (large 60S subunit)

Evidence

Reading pass · 2 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2014 Cryo-EM structure of the P. falciparum 80S ribosome at 3.2 Å resolution resolved RPL3 (60S ribosomal protein L3) as a structural component of the large (60S) subunit. The structure placed RPL3 within the ribosomal large subunit architecture, establishing its membership in the native P. falciparum cytoplasmic ribosome complex. Cryo-EM structure determination at 3.2 Å resolution of the P. falciparum 80S ribosome in complex with emetine eLife Medium 24913268
2025 In situ cryo-electron tomography of P. falciparum-infected erythrocytes resolved eight high-resolution structures of the native malarial ribosome in actively translating states; RPL3 is present as a structural component of the large subunit in these native translation-elongation complexes captured inside the cell. In situ cryo-electron tomography inside P. falciparum-infected human erythrocytes; atomic-resolution structural modelling Nature structural & molecular biology Medium 40825879

Source papers

Stage 0 corpus · 6 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine. eLife 276 24913268
2017 Mefloquine targets the Plasmodium falciparum 80S ribosome to inhibit protein synthesis. Nature microbiology 138 28288098
2015 Dynamical features of the Plasmodium falciparum ribosome during translation. Nucleic acids research 46 26432834
2025 Integrated structural biology of the native malarial translation machinery and its inhibition by an antimalarial drug. Nature structural & molecular biology 10 40825879
2025 Antimalarial drug artemisinin stabilizes PfRACK1 binding to the ribosome. Structure (London, England : 1993) 4 40480224
2021 Screening of viral-vectored P. falciparum pre-erythrocytic candidate vaccine antigens using chimeric rodent parasites. PloS one 2 34252120