Affinage · Plasmodium

CEN3

PF3D7_1027700 · centrin-3

Annotated
2026-09-08
7 papers in source corpus 5 papers cited in narrative 5 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CEN3 (PF3D7_1027700) is a calcium-binding centrin that associates with the centrosome-equivalent centriolar plaque of Plasmodium during cell division (PMID:18693242, PMID:34535568). It is expressed across sporozoite, asexual blood, gametocyte, and oocyst stages and localizes in close proximity to the nucleus, specifically to the extranuclear compartment of the centriolar plaque — a position distinct from the intranuclear region where microtubules are nucleated (PMID:18693242, PMID:34535568). At this site CEN3 physically interacts with CEN1 (by reciprocal co-immunoprecipitation) and co-localizes with the Sfi1-like plaque protein PfSlp, and in the P. berghei ortholog it forms part of a multi-protein centrin complex including CEN-1, CEN-2, and CEN-4 (PMID:37130129, PMID:30541825). In P. berghei, cen-3 could not be deleted, indicating the gene is essential for asexual blood-stage development (PMID:30541825). Biochemically, recombinant CEN3 undergoes calcium-inducible liquid-liquid phase separation in vitro, forming droplets that fuse and wet surfaces; unlike CEN1, CEN3 condensates mature partially irreversibly toward a gel-like state, a temperature-dependent process, and this behavior depends on its disordered N-terminus and EF-hand calcium-binding motifs, establishing Ca2+-specific condensation as a defining property (PMID:38150475). Beyond its centriolar-plaque localization, essentiality, centrin-complex membership, and calcium-driven condensation, the precise cellular function of CEN3 in centriolar plaque biology has not been mechanistically resolved in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2008 Medium

    Established that CEN3 is a broadly expressed centrin positioned at the parasite centrosome, placing it at the machinery of cell division.

    Evidence Immunoelectron and confocal/widefield immunofluorescence microscopy with anti-centrin and anti-alpha-tubulin antibodies in P. falciparum

    PMID:18693242

    Open questions at the time
    • Antibody recognizes multiple centrins and does not exclusively report CEN3
    • No functional role assigned beyond spatial association with the centrosome
    • Sub-compartment within the centriolar plaque not resolved
  2. 2019 Medium

    Tested whether CEN3 is dispensable and whether it acts alone; the ortholog proved essential and was shown to sit within a multi-centrin complex.

    Evidence Failed cen-3 gene deletion (essentiality inference) and multi-protein complex formation analysis with PbCEN-4 in P. berghei

    PMID:30541825

    Open questions at the time
    • Essentiality inferred from failed knockout rather than conditional depletion
    • Stoichiometry and architecture of the centrin complex not defined
    • Direct versus indirect nature of CEN3 contacts within the complex unresolved
  3. 2021 High

    Resolved where within the centriolar plaque CEN3 acts, distinguishing its extranuclear position from the intranuclear microtubule-nucleating compartment.

    Evidence Super-resolution STED microscopy and correlative light/electron tomography with affinity-purified anti-PfCentrin3 antibody in P. falciparum NF54

    PMID:34535568

    Open questions at the time
    • Functional consequence of extranuclear localization not established
    • Dynamics of CEN3 recruitment during the cell cycle not tracked
    • Molecular tethers holding CEN3 in the extranuclear compartment unknown
  4. 2023 Medium

    Defined CEN3's physical partners at the plaque, connecting it to CEN1 and the Sfi1-like protein PfSlp.

    Evidence Reciprocal co-immunoprecipitation (PfCen1-GFP pulldown) and dual-color STED super-resolution microscopy in P. falciparum

    PMID:37130129

    Open questions at the time
    • No cross-linking or quantitative enrichment analysis performed
    • Whether the CEN3-CEN1 interaction is direct not shown
    • Functional role of the CEN3-PfSlp co-localization not tested
  5. 2023 High

    Provided a biophysical mechanism for CEN3 accumulation by showing calcium-specific, EF-hand- and N-terminus-dependent phase separation, and distinguished CEN3 from CEN1 by its partial condensate irreversibility.

    Evidence In vitro reconstitution with recombinant tagged and untagged PfCen3, turbidity/light-scattering, live droplet fusion imaging at varying temperatures, and EDTA dissolution assays

    PMID:38150475

    Open questions at the time
    • Phase separation demonstrated in vitro only, not confirmed at the centriolar plaque in vivo
    • Physiological consequence of irreversible condensate maturation unknown
    • Whether CEN3 condensation recruits or scaffolds its complex partners not tested

Open questions

Synthesis pass · forward-looking unresolved questions
  • How Ca2+-driven CEN3 condensation is coupled to its essential role in centriolar plaque function and parasite division remains unresolved.
  • No conditional depletion linking loss of CEN3 to a specific division defect
  • In vitro phase separation not yet connected to in vivo condensate formation
  • Direct molecular activity of CEN3 within the plaque undefined

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
Centrin multi-protein complex (CEN-1, CEN-2, CEN-3, CEN-4) at the centriolar plaque

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2008 CEN3 (PF3D7_1027700) protein is expressed in sporozoites, asexual blood forms, gametocytes, and oocysts, and localizes in close proximity to the nucleus of sporozoites and asexual schizonts, with immunofluorescence double-staining with alpha-tubulin indicating association with the parasite centrosome (centriolar plaque). Immunoelectron microscopy and confocal/widefield immunofluorescence microscopy with anti-centrin and anti-alpha-tubulin antibodies in P. falciparum The Journal of biological chemistry Medium 18693242
2021 CEN3 (PF3D7_1027700) localizes to the extranuclear compartment of the centriolar plaque in P. falciparum blood-stage schizonts, as established using a polyclonal rabbit antibody raised against recombinant PfCen3-6His (PF3D7_1027700.1); this extranuclear position is distinct from the intranuclear compartment where microtubules are nucleated. Super-resolution STED microscopy and correlative light/electron tomography with affinity-purified anti-PfCentrin3 antibody in P. falciparum NF54 strain Life science alliance High 34535568
2023 CEN3 (PF3D7_1027700) undergoes calcium-inducible liquid-liquid phase separation (LLPS) in vitro: recombinant PfCen3 forms droplets upon Ca2+ addition that display fusion and surface wetting; unlike PfCen1, PfCen3 condensates show partial irreversibility (maturation towards a gel-like state) upon EDTA addition, a process slowed at lower temperature. Mg2+ causes only a reduced response compared to Ca2+, indicating calcium-specificity. The disordered N-terminus and calcium-binding EF-hand motifs are defined as essential features for this condensation. In vitro recombinant protein phase separation assay (6His-tagged and untagged PfCen3 expressed in E. coli), turbidity/light-scattering measurements, live droplet imaging including fusion-event analysis at varying temperatures, EDTA dissolution assays PLoS pathogens High 38150475
2023 CEN3 (PF3D7_1027700) was identified as a specific co-immunoprecipitation hit with PfCen1-GFP in P. falciparum, indicating a physical interaction between CEN3 and CEN1 at the centriolar plaque; CEN3 co-localizes with the Sfi1-like centriolar plaque protein PfSlp at the extranuclear centriolar plaque as shown by dual-color STED microscopy. Co-immunoprecipitation (PfCen1-GFP pulldown with anti-PfCen3 as readout), reciprocal IP, dual-color STED super-resolution microscopy with anti-PfCen3 antibody in P. falciparum PLoS pathogens Medium 37130129
2019 In P. berghei, deletion of cen-3 (ortholog of PF3D7_1027700) could not be achieved, indicating that CEN3 is likely essential for asexual blood-stage development. Additionally, CEN-3 forms part of a multi-protein complex with other centrins (CEN-1, CEN-2, CEN-4) as shown by complex formation experiments with PbCEN-4. Gene deletion attempts in P. berghei (failed knockout indicating essentiality); multi-protein complex formation analysis with other centrins Biology open Medium 30541825

Source papers

Stage 0 corpus · 7 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2008 Centrins, cell cycle regulation proteins in human malaria parasite Plasmodium falciparum. The Journal of biological chemistry 68 18693242
2023 An Sfi1-like centrin-interacting centriolar plaque protein affects nuclear microtubule homeostasis. PLoS pathogens 0 37130129
2023 Malaria parasite centrins can assemble by Ca2+-inducible condensation. PLoS pathogens 0 38150475
2021 An extended DNA-free intranuclear compartment organizes centrosome microtubules in malaria parasites. Life science alliance 0 34535568
2019 Plasmodium centrin PbCEN-4 localizes to the putative MTOC and is dispensable for malaria parasite proliferation. Biology open 0 30541825
2012 Arrest of nuclear division in Plasmodium through blockage of erythrocyte surface exposed ribosomal protein P2. PLoS pathogens 0 22912579
2010 Functional identification of the Plasmodium centromere and generation of a Plasmodium artificial chromosome. Cell host & microbe 0 20227667