Affinage · Plasmodium

EPS15

PF3D7_1025000 · Eps15-like protein

Annotated
2026-09-08
27 papers in source corpus 8 papers cited in narrative 4 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_1025000 (EPS15) is a membrane-associated endocytic protein of Plasmodium falciparum that mediates uptake of host-cell cytosol (hemoglobin) at the parasite plasma membrane throughout the asexual blood stages (PMID:26284889, PMID:38039338, PMID:33842474, PMID:32310999, PMID:34765267, PMID:33095255). Live-cell imaging of GFP-tagged EPS15 traces vesicles that originate at the parasite plasma membrane, migrate through the cytosol, and terminate at a Nile Red-positive neutral-lipid storage structure juxtaposed to the food vacuole; pharmacological inhibition of endocytosis blocks both vesicle development and their delivery to this site, establishing EPS15 in endocytic vesicle generation (PMID:26284889). EPS15 is a component of the clathrin-independent, AP-2-labelled cytostome-proximal 'K13 compartment', where reciprocal proximity biotinylation shows it physically associates with K13, and its conditional inactivation reduces hemoglobin uptake to the digestive vacuole at both ring and trophozoite stages while conferring ring-stage artemisinin tolerance (PMID:38039338, PMID:33842474, PMID:32310999, PMID:34765267, PMID:33095255). Beyond this endocytic/host-cytosol-uptake role, no further biochemical mechanism (e.g. defined enzymatic activity or direct structural role) for EPS15 has been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2015 Medium

    It was unknown whether PF3D7_1025000 participated in membrane trafficking; GFP imaging established it as a membrane-bound protein driving endocytic vesicles from the parasite plasma membrane to a neutral-lipid storage site near the food vacuole.

    Evidence GFP-fusion time-lapse imaging, Nile Red staining, food-vacuole marker co-staining, associated-protein proteomics, and pharmacological endocytosis inhibition in P. falciparum

    PMID:26284889

    Open questions at the time
    • Molecular partners driving vesicle scission or transport not defined beyond generic 'endocytosis modulators'
    • Direct biochemical activity of the protein not established
    • Relationship of the lipid-storage endpoint to hemoglobin catabolism not resolved
  2. 2020 High

    The identity of the endocytic machinery underlying host-cell-cytosol uptake and artemisinin response was unclear; reciprocal proximity biotinylation and conditional inactivation placed EPS15 in the AP-2-labelled K13 compartment as a K13 interactor required for hemoglobin uptake and ring-stage artemisinin susceptibility.

    Evidence Reciprocal DiQ-BioID, co-localization imaging, conditional inactivation, dextran uptake assay, and ring-stage survival assay in P. falciparum

    PMID:32310999 PMID:33095255 PMID:33842474 PMID:34765267 PMID:38039338

    Open questions at the time
    • Whether the EPS15–K13 interaction is direct or bridged by other compartment proteins is not resolved
    • Structural basis of EPS15 recruitment to the cytostome-proximal compartment unknown
    • Mechanism linking reduced endocytosis to artemisinin tolerance not defined at the molecular level
  3. 2023 Low

    It was unclear whether EPS15 associates with the clathrin/AP-1 trafficking machinery; GFP-trap interactome pulldowns detected EPS15 at low abundance with PfCLC and AP-1, indicating at most a loose or indirect link rather than core membership.

    Evidence GFP-trap pulldown with mass spectrometry of PfCLC and AP-1 γ subunit in P. falciparum

    PMID:41451970

    Open questions at the time
    • Single low-abundance pulldown without reciprocal or functional validation of the association
    • Cannot distinguish direct interaction from co-compartmentalization
    • Functional significance of any clathrin/AP-1 link untested
  4. 2024 Medium

    Because EPS15 loss confers artemisinin tolerance, it was important to test whether field-derived EPS15 sequence variants drive resistance; engineered isogenic parasites showed none of the EPS15 mutations tested independently reduced artemisinin susceptibility.

    Evidence CRISPR/selection-linked integration of recodonized multi-mutant EPS15 into 3D7 and ring-stage survival assay with dihydroartemisinin

    PMID:38700363

    Open questions at the time
    • Only specific tested variants assessed; other mutations or combinations not excluded
    • Does not address whether EPS15 expression-level changes affect resistance
    • Single lab, single genetic background (3D7)

Open questions

Synthesis pass · forward-looking unresolved questions
  • The direct biochemical activity of EPS15, its precise molecular role within the K13/AP-2 compartment, and the mechanistic link between its endocytic function and artemisinin tolerance remain undefined.
  • No defined enzymatic or structural function for the protein
  • Whether EPS15–K13 binding is direct is unresolved
  • Mechanism connecting reduced endocytosis to drug tolerance not established

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
K13 compartment (AP-2-labelled, clathrin-independent cytostome-proximal endocytic compartment)

Evidence

Reading pass · 4 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2015 EPS15 (PfEHD / PF3D7_1025000) is a membrane-bound protein that associates with a vesicular network in P. falciparum. GFP-tagging showed vesicles originating at the parasite plasma membrane, migrating through the cytosol, and culminating in a large multi-vesicular-like structure juxtaposed to but outside the food vacuole. This structure co-stained with the neutral-lipid dye Nile Red, identifying it as a neutral lipid storage site. Proteomic analysis identified endocytosis modulators as EPS15-associated proteins. Treatment with endocytosis inhibitors blocked vesicle development and their targeting to this lipid storage site, demonstrating a role in endocytic vesicle generation at the parasite plasma membrane. GFP-fusion live-cell imaging (time-lapse microscopy), Nile Red neutral-lipid staining, co-staining with food vacuole membrane marker, proteomic (mass spectrometry) identification of associated proteins, pharmacological inhibition of endocytosis Biochimica et biophysica acta Medium 26284889
2020 EPS15 (PF3D7_1025000) was identified as a component of the K13 compartment in P. falciparum by dimerization-induced proximity biotinylation (DiQ-BioID). EPS15 co-localised with K13 at a clathrin-independent, AP-2-labelled endocytic compartment (cytostome-associated). Reciprocal DiQ-BioID using EPS15 as bait also identified K13, confirming the interaction. Conditional inactivation of EPS15 (along with UBP1 and AP-2μ) reduced hemoglobin uptake to the digestive vacuole at both ring and trophozoite stages and conferred ring-stage artemisinin tolerance, demonstrating that EPS15 is required for host-cell-cytosol endocytosis throughout asexual blood stages. DiQ-BioID proximity biotinylation (reciprocal), live-cell fluorescence imaging/co-localization, conditional protein inactivation (knock-sideways or analogous), fluorescent dextran uptake assay, ring-stage survival assay (RSA) for artemisinin susceptibility PLoS pathogens (cited as Birnbaum et al. 2020 throughout corpus) High 32310999 33095255 33842474 34765267 38039338
2023 EPS15 (PF3D7_1025000) was detected (at low abundance) in GFP-trap pulldowns of clathrin light chain (PfCLC) and AP-1 γ subunit in P. falciparum, overlapping with the K13 interactome. This suggests EPS15 may be loosely or indirectly associated with the clathrin-AP-1 complex, though it is not a core component of it. GFP-trap pulldown followed by mass spectrometry (interactome analysis) Traffic (Copenhagen, Denmark) Low 41451970
2024 Testing 135 mutations in K13 compartment proteins (including multiple mutations in EPS15/PF3D7_1025000) introduced into 3D7 parasites via selection-linked integration showed that none of the EPS15 mutations tested conferred artemisinin resistance in the ring-stage survival assay, indicating that the specific field-derived variants of EPS15 tested do not independently reduce ART susceptibility. CRISPR/selection-linked integration of recodonized multi-mutant gene, ring-stage survival assay (RSA) with dihydroartemisinin mBio Medium 38700363

Source papers

Stage 0 corpus · 27 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2015 Eps15 homology domain containing protein of Plasmodium falciparum (PfEHD) associates with endocytosis and vesicular trafficking towards neutral lipid storage site. Biochimica et biophysica acta 13 26284889
1999 Expression and characterisation of a Plasmodium falciparum protein containing domains homologous to sarcalumenin and a tyrosine kinase substrate, eps15. International journal for parasitology 4 10404267
2026 Clathrins Are Involved in the Endocytosis of Host Cytosol in the Malaria Parasite. Traffic (Copenhagen, Denmark) 0 41451970
2026 Parasite clearance in patients with Plasmodium vivax monoinfection treated with artesunate in Cambodia: an observational secondary analysis of trial data. The Lancet. Microbe 0 41662857
2026 Targeting protein-protein interactions in Plasmodium: from asexual replication to sexual development. Parasites & vectors 0 42001110
2026 Hemoglobin Digestion Genes Are Conserved in Lizard-Infective Plasmodium Species With Different Host Cellular Niches. Ecology and evolution 0 42266499
2025 Drug resistance-associated mutations in Plasmodium UBP-1 disrupt its essential deubiquitinating activity. The Journal of biological chemistry 0 39909372
2025 Emerging Plasmodium falciparum K13 gene mutation to artemisinin-based combination therapies and partner drugs among malaria-infected population in sub-Saharan Africa. Parasites, hosts and diseases 0 40452273
2025 Characterization of the malaria parasite Plasmodium falciparum Tepsin homolog. Microbiology spectrum 0 40586818
2024 The Digestive Vacuole of the Malaria Parasite: A Specialized Lysosome. Pathogens (Basel, Switzerland) 0 38535526
2024 Impact of different mutations on Kelch13 protein levels, ART resistance, and fitness cost in Plasmodium falciparum parasites. mBio 0 38700363
2024 Enhancing Gene Co-Expression Network Inference for the Malaria Parasite Plasmodium falciparum. Genes 0 38927622
2024 Genetic surveillance shows spread of ACT resistance during period of malaria decline in Vietnam (2018-2020). Frontiers in genetics 0 39687741
2023 Protein KIC5 is a novel regulator of artemisinin stress response in the malaria parasite Plasmodium falciparum. Scientific reports 0 36624300
2023 Malaria Molecular Surveillance in the Peruvian Amazon with a Novel Highly Multiplexed Plasmodium falciparum AmpliSeq Assay. Microbiology spectrum 0 36840586
2023 Stable endocytic structures navigate the complex pellicle of apicomplexan parasites. Nature communications 0 37061511
2023 The Kelch13 compartment contains highly divergent vesicle trafficking proteins in malaria parasites. PLoS pathogens 0 38039338
2022 Methods Used to Investigate the Plasmodium falciparum Digestive Vacuole. Frontiers in cellular and infection microbiology 0 35096663
2022 The Plasmodium falciparum Nuclear Protein Phosphatase NIF4 Is Required for Efficient Merozoite Invasion and Regulates Artemisinin Sensitivity. mBio 0 35938722
2022 Babesia, Theileria, Plasmodium and Hemoglobin. Microorganisms 0 36014069
2021 Artemisinin susceptibility in the malaria parasite Plasmodium falciparum: propellers, adaptor proteins and the need for cellular healing. FEMS microbiology reviews 0 33095255
2021 How Malaria Parasites Acquire Nutrients From Their Host. Frontiers in cell and developmental biology 0 33842474
2021 Plasmodium falciparum resistance to ACTs: Emergence, mechanisms, and outlook. International journal for parasitology. Drugs and drug resistance 0 34090067
2021 Integration of population and functional genomics to understand mechanisms of artemisinin resistance in Plasmodium falciparum. International journal for parasitology. Drugs and drug resistance 0 34102588
2021 Mutation in the Plasmodium falciparum BTB/POZ Domain of K13 Protein Confers Artemisinin Resistance. Antimicrobial agents and chemotherapy 0 34606334
2020 Insights into the intracellular localization, protein associations and artemisinin resistance properties of Plasmodium falciparum K13. PLoS pathogens 0 32310999
2020 Protecting future antimalarials from the trap of resistance: Lessons from artemisinin-based combination therapy (ACT) failures. Journal of pharmaceutical analysis 0 34765267