Affinage · Plasmodium

PF3D7_1021900

PHAX domain-containing protein, putative

Audit flag: identity unverified Ortholog evidence only
Annotated
2026-09-08
1 papers in source corpus 1 papers cited in narrative 1 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

The PHAX domain-containing protein encoded by PF3D7_1021900 has been characterized in the available corpus only through its physical association with GBP2 in Plasmodium berghei blood-stage parasites, where it was recovered as a GBP2 interacting partner by immunoprecipitation-mass spectrometry, implicating it as a candidate exportin-1 adaptor in the parasite mRNA nuclear export pathway (PMID:34604117). Beyond this single interaction, no direct functional, biochemical, or structural characterization of PF3D7_1021900 itself has been reported in the available corpus, and its role is inferred from the biology of the GBP2 complex rather than established for the protein directly.

Mechanistic history

Synthesis pass · year-by-year structured walk · 1 step
  1. 2021 Low

    To place PF3D7_1021900 in a pathway, its physical partners were unknown; identifying it in a GBP2 pulldown established a candidate link to the mRNA nuclear export machinery.

    Evidence Immunoprecipitation coupled to mass spectrometry of GBP2 in P. berghei blood-stage parasites

    PMID:34604117

    Open questions at the time
    • Single Co-IP/MS in a study focused on GBP2, with no reciprocal pulldown or direct validation of the interaction from the PF3D7_1021900 side
    • No functional evidence that PF3D7_1021900 acts as an exportin-1 adaptor or participates in mRNA export
    • The interaction was shown for the P. berghei ortholog, not directly for PF3D7_1021900 in P. falciparum

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether PF3D7_1021900 has any intrinsic activity, direct binding to exportin-1 or RNA, essential function, or a defined subcellular localization remains entirely unestablished.
  • No genetic knockout, knockdown, or complementation data for PF3D7_1021900
  • No structural model or PHAX-domain function validated for this protein
  • No demonstrated role in mRNA export beyond guilt-by-association with GBP2

Mechanism profile

Synthesis pass · controlled-vocabulary classification

Evidence

Reading pass · 1 per-paper finding extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2021 The PHAX domain-containing protein (PF3D7_1021900 ortholog in P. berghei) was identified as an interacting partner of GBP2 by immunoprecipitation coupled to mass spectrometry (IP-MS), implicating it as an adaptor protein for exportin-1 in the mRNA export pathway of malaria parasites. Immunoprecipitation coupled to mass spectrometry (IP-MS) Frontiers in cellular and infection microbiology Low 34604117

Source papers

Stage 0 corpus · 1 paper · ranked by NIH iCite citations
Year Title Journal Citations PMID
2021 Roles and Cellular Localization of GBP2 and NAB2 During the Blood Stage of Malaria Parasites. Frontiers in cellular and infection microbiology 6 34604117