Affinage · Plasmodium

PF3D7_1008700

tubulin beta chain

Annotated
2026-09-08
3 papers in source corpus 3 papers cited in narrative 3 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_1008700 encodes P. falciparum beta-tubulin, a 445-amino-acid cytoskeletal protein whose gene contains two introns, is unlinked from the alpha-tubulin locus, and is transcribed as multiple beta-tubulin messages in blood-stage parasites (PMID:2181306). As a microtubule component, it is required for the mitotic divisions of schizogony: purified recombinant parasite beta-tubulin directly binds the dinitroaniline herbicide trifluralin through a site poorly conserved in mammalian (bovine) tubulin, and dinitroaniline treatment blocks schizogony, arrests mitotic division, and produces abnormal microtubular structures (PMID:16406111). This parasite-selective drug-binding site distinguishes it from human tubulin (PMID:16406111). Beta-tubulin also engages the Apicomplexan protein apicortin in vitro, an interaction whose pharmacological disruption impairs blood-stage growth (PMID:33633135).

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 1990 Medium

    Establishing the gene structure and expression was the necessary first step to define P. falciparum beta-tubulin as a discrete, characterizable cytoskeletal gene distinct from its alpha-tubulin counterpart.

    Evidence Genomic/cDNA library screening, DNA sequencing, and Northern blot of blood-stage parasites

    PMID:2181306

    Open questions at the time
    • The identity and significance of the three distinct transcript sizes were not resolved
    • No protein-level localization or function established at this stage
  2. 2005 Medium

    Whether beta-tubulin harbors a parasite-selective drug target was answered by showing direct dinitroaniline binding to parasite but not mammalian tubulin, coupled to a mitotic-arrest phenotype, defining beta-tubulin's role in schizogony and its exploitable pharmacology.

    Evidence Radiolabelled trifluralin binding to purified recombinant parasite tubulin, in vitro growth inhibition, and microscopy of microtubular structures

    PMID:16406111

    Open questions at the time
    • The precise residues forming the dinitroaniline-binding site were not mapped
    • Binding was measured on total recombinant tubulin, not the beta-subunit in isolation with defined stoichiometry
  3. 2021 Low

    Whether beta-tubulin participates in a defined protein–protein interaction relevant to survival was addressed by identifying apicortin as an in vitro binding partner whose disruption impairs blood-stage growth.

    Evidence In silico docking with in vitro binding, Tamoxifen-mediated interaction disruption, and blood-stage growth assay

    PMID:33633135

    Open questions at the time
    • No genetic validation of the specific apicortin–beta-tubulin interaction; relies on pharmacology and in vitro binding
    • Tamoxifen's growth effect cannot be attributed solely to this interaction
    • Structural details and cellular localization of the complex not established

Open questions

Synthesis pass · forward-looking unresolved questions
  • Direct genetic evidence for the essentiality and in vivo function of PF3D7_1008700, and a residue-level structure of its parasite-selective drug-binding site, remain to be established.
  • No knockout/conditional-knockdown data for the gene itself
  • No high-resolution structure of the dinitroaniline-binding site
  • Contribution of individual transcripts and any stage specificity unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2005 Radiolabelled trifluralin (a dinitroaniline herbicide) interacted directly with purified, recombinant P. falciparum tubulin (including beta-tubulin) but to a much lesser extent with bovine tubulins, indicating that P. falciparum beta-tubulin contains a dinitroaniline/phosphorothioamidate-binding site not conserved in humans. Treatment with trifluralin and oryzalin blocked schizogony, inhibited mitotic division, and caused accumulation of abnormal microtubular structures. Radiolabelled ligand-binding assay with purified recombinant parasite tubulin; in vitro parasite growth inhibition assay; microscopy of microtubular structures Molecular and biochemical parasitology Medium 16406111
1990 The P. falciparum beta-tubulin gene was isolated and fully sequenced at the genomic level; the deduced polypeptide is 445 amino acids long, shares 88% amino acid homology with chicken brain beta-tubulin, contains two introns (362 bp and 163 bp), and is unlinked from the alpha-tubulin gene. Northern blot analysis detected three beta-tubulin transcripts (3.6 kb, 2.9 kb, 2.0 kb) in blood-stage parasites. Genomic and cDNA library screening with oligonucleotide probe; DNA sequencing; Northern blot analysis Molecular and biochemical parasitology Medium 2181306
2021 P. falciparum apicortin (PfApicortin) interacts with both P. falciparum α-tubulin-I and β-tubulin in vitro. Disruption of the PfApicortin–tubulin interaction with the p25-domain-binding drug Tamoxifen inhibited growth and progression of blood-stage P. falciparum, establishing that PfApicortin–β-tubulin interaction is required for parasite survival. In silico docking and in vitro binding studies; small-molecule (Tamoxifen) disruption of protein–protein interaction; P. falciparum blood-stage growth assay Scientific reports Low 33633135

Source papers

Stage 0 corpus · 3 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2005 Cellular and molecular actions of dinitroaniline and phosphorothioamidate herbicides on Plasmodium falciparum: tubulin as a specific antimalarial target. Molecular and biochemical parasitology 69 16406111
1990 Isolation of alpha- and beta-tubulin genes of Plasmodium falciparum using a single oligonucleotide probe. Molecular and biochemical parasitology 21 2181306
2021 Interaction of Plasmodium falciparum apicortin with α- and β-tubulin is critical for parasite growth and survival. Scientific reports 20 33633135