Affinage · Plasmodium

PF3D7_0930800

regulator of chromosome condensation, putative

Audit flag: identity unverified
Annotated
2026-09-08
1 papers in source corpus 1 papers cited in narrative 4 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_0930800 (PfRCC-PIP) is an essential Plasmodium falciparum protein that functions as a scaffold coordinating phosphorylation and dephosphorylation, established through direct interaction and functional assays (PMID:30429842). It directly binds P. falciparum Protein Phosphatase type-1 (PfPP1) in vitro and forms a complex with PfPP1 in parasite lysate, acting as a major regulatory partner of the phosphatase (PMID:30429842); in a heterologous Xenopus oocyte system, PfRCC-PIP interacts with endogenous PP1 and synergizes with suboptimal progesterone to drive oocyte maturation, indicating that it activates PP1 activity (PMID:30429842). Its RCC1 motif-containing region additionally binds the parasite kinase CDPK7, marking the protein as a kinase-anchoring platform as well as a phosphatase anchor (PMID:30429842). Attempted knockout failed to yield viable parasites, indicating the gene is essential for P. falciparum survival (PMID:30429842). Beyond these interaction and essentiality findings, no further mechanistic detail — including substrate specificity, structural basis of binding, or the functional consequence of the CDPK7 association — has been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2018 Medium

    It was unknown which regulatory proteins govern PfPP1 in P. falciparum; identifying a direct PfPP1-binding partner established PF3D7_0930800 as a phosphatase-anchoring regulator.

    Evidence In vitro direct interaction assay plus co-immunoprecipitation/complex detection in parasite lysate

    PMID:30429842

    Open questions at the time
    • The PfPP1-binding motif/interface on PF3D7_0930800 was not mapped by mutagenesis
    • Substrates dephosphorylated by the PfPP1 complex were not identified
  2. 2018 Medium

    Whether the interaction was merely physical or functionally regulatory was open; a heterologous oocyte assay showed PfRCC-PIP activates PP1 activity.

    Evidence Xenopus oocyte maturation assay with progesterone dose-response and endogenous PP1

    PMID:30429842

    Open questions at the time
    • The activating effect was shown on endogenous Xenopus PP1, not directly quantified on PfPP1 in the parasite
    • Physiological process in the parasite regulated by this activation is undefined
  3. 2018 Low

    It was unclear whether the protein engaged only phosphatases; binding of its RCC1 motif region to CDPK7 established it as a dual kinase/phosphatase anchor.

    Evidence Region-specific protein interaction assay with CDPK7

    PMID:30429842

    Open questions at the time
    • Single interaction assay without mutagenesis validation or defined functional consequence
    • No reciprocal or in-parasite confirmation of the CDPK7 association
    • Whether kinase and phosphatase binding are simultaneous or mutually exclusive is unknown
  4. 2018 Medium

    The biological importance of the gene was unknown; failure to obtain viable knockouts indicated essentiality for blood-stage survival.

    Evidence Reverse genetics / attempted gene knockout

    PMID:30429842

    Open questions at the time
    • Essentiality inferred from KO failure, not confirmed by conditional knockdown/knockout
    • The essential stage and process were not defined

Open questions

Synthesis pass · forward-looking unresolved questions
  • How PF3D7_0930800 integrates PfPP1 and CDPK7 activities on shared substrates, and which cellular process depends on this scaffold, remains unresolved.
  • No substrates of the coordinated kinase/phosphatase platform identified
  • No structural model of the scaffold or its binding interfaces
  • Subcellular localization and stage-specific role uncharacterized

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
PfRCC-PIP–PfPP1 complex

Evidence

Reading pass · 4 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2018 PF3D7_0930800 (PfRCC-PIP) directly interacts with P. falciparum Protein Phosphatase type-1 (PfPP1) in vitro and forms a complex with PfPP1 in the parasite, acting as a major regulatory partner of PfPP1. In vitro direct interaction assay and co-immunoprecipitation/complex detection in parasite lysate Frontiers in microbiology Medium 30429842
2018 In the Xenopus oocyte model, PfRCC-PIP (PF3D7_0930800) interacts with endogenous PP1 and acts in synergy with suboptimal doses of progesterone to trigger oocyte maturation, indicating a regulatory (activating) effect on PP1 activity. Xenopus oocyte functional assay with progesterone-induced maturation Frontiers in microbiology Medium 30429842
2018 The RCC1 motif-containing region of PfRCC-PIP (PF3D7_0930800) interacts with the parasite kinase CDPK7, identifying the protein as a kinase anchoring protein in addition to its role as a phosphatase anchor. Protein interaction assay (region-specific binding to CDPK7) Frontiers in microbiology Low 30429842
2018 Reverse genetic studies failed to produce viable knock-out parasites for PfRCC-PIP (PF3D7_0930800), suggesting the gene is essential for P. falciparum survival. Reverse genetics / attempted gene knockout Frontiers in microbiology Medium 30429842

Source papers

Stage 0 corpus · 1 paper · ranked by NIH iCite citations
Year Title Journal Citations PMID
2018 Characterization of a Protein Phosphatase Type-1 and a Kinase Anchoring Protein in Plasmodium falciparum. Frontiers in microbiology 11 30429842