Affinage · Plasmodium

PF3D7_0821700

60S ribosomal protein L22, putative

Audit flag: identity unverified
Annotated
2026-09-08
6 papers in source corpus 4 papers cited in narrative 4 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_0821700 (L22) is a nuclear genome-encoded large-subunit ribosomal protein that serves as a structural component of the 60S large subunit of the P. falciparum cytoplasmic 80S ribosome (PMID:24913268). It has been resolved within the large subunit in successive high-resolution cryo-EM structures of the parasite ribosome purified from blood-stage schizonts (PMID:24913268, PMID:26432834) and visualized in situ in actively translating native ribosomes inside infected human erythrocytes by cryo-electron tomography (PMID:40825879). Molecular modeling predicts that L22 contributes together with the apicoplast-encoded PfRpl4 to the polypeptide exit tunnel that can be occupied by azithromycin, and in vitro azithromycin-resistance selection left the L22 sequence unchanged while mutations arose in PfRpl4, indicating a structural exit-tunnel role for L22 rather than a direct drug-resistance determinant (PMID:17110371). Beyond its membership in the ribosomal large subunit and its predicted exit-tunnel contribution, no direct biochemical or mutagenesis experiments defining a unique function for L22 have been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2006 Low

    To locate the target of azithromycin action in the parasite, resistance selection tested whether L22, predicted to line the polypeptide exit tunnel, was itself a resistance determinant, establishing L22's inferred structural role in the tunnel while excluding it as a mutational drug-resistance site.

    Evidence In vitro azithromycin resistance selection with sequencing of resistant lines and molecular modeling of the exit tunnel in P. falciparum 7G8 and Dd2

    PMID:17110371

    Open questions at the time
    • Structural role inferred from modeling and absence of mutations, not from direct biochemical assay of L22
    • No mutagenesis of L22 to test its exit-tunnel contribution
    • Interaction with PfRpl4 predicted, not experimentally demonstrated
  2. 2014 Medium

    The first atomic-resolution cryo-EM structure of the parasite ribosome resolved where L22 sits, placing it definitively within the cytoplasmic 60S large subunit rather than in any other complex.

    Evidence Cryo-EM structure of the P. falciparum 80S ribosome at 3.2 Å resolution

    PMID:24913268

    Open questions at the time
    • L22 was not the focus and received no functional validation
    • No mutagenesis linking its position to a specific translational function
  3. 2015 Medium

    Cryo-EM reconstructions from schizont-purified ribosomes confirmed L22 as a stable structural member of the translating large subunit, reinforcing its ribosomal assignment across biological samples.

    Evidence Cryo-EM reconstructions with flexible fitting of atomic models from P. falciparum schizont-purified ribosomes

    PMID:26432834

    Open questions at the time
    • No functional assay specific to L22
    • Does not distinguish L22's role from that of neighboring large-subunit proteins
  4. 2025 Medium

    In situ cryo-electron tomography confirmed that L22 is a component of native, actively translating ribosomes in their cellular context, extending its structural assignment from purified particles to the intact parasite.

    Evidence In situ cryo-electron tomography of P. falciparum-infected human erythrocytes yielding eight high-resolution structures of the native ribosome in translating states

    PMID:40825879

    Open questions at the time
    • L22 not individually studied functionally
    • No perturbation to test its contribution to translation in vivo

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether L22 has any function beyond structural membership in the 60S subunit — including a directly demonstrated contribution to the polypeptide exit tunnel or an interaction with PfRpl4 — remains unresolved.
  • No mutagenesis or knockdown of L22
  • No biochemical demonstration of the predicted L22–PfRpl4 exit-tunnel interaction
  • No extra-ribosomal or moonlighting role tested

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
60S large ribosomal subunit of the cytoplasmic 80S ribosome

Evidence

Reading pass · 4 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2006 PF3D7_0821700 (PfRpl22/L22), the nuclear genome-encoded large subunit ribosomal protein L22, is predicted to associate with the apicoplast-encoded ribosomal protein L4 (PfRpl4) and the large subunit rRNA to form the 50S ribosome polypeptide exit tunnel that can be occupied by azithromycin. Resistance selection experiments showed that the PfRpl22 sequence remained unchanged in azithromycin-resistant lines, while mutations in PfRpl4 altered the tunnel, implying L22's structural role in the exit tunnel but not as a direct resistance determinant. In vitro resistance selection, sequencing of resistant parasite lines, molecular modeling of the polypeptide exit tunnel The Journal of biological chemistry Low 17110371
2014 L22 (PF3D7_0821700) was resolved as a component of the P. falciparum 80S ribosome large subunit in the first atomic-resolution cryo-EM structure of the parasite ribosome, placing it structurally within the cytoplasmic 60S ribosomal particle. Cryo-EM structure of the P. falciparum 80S ribosome at 3.2 Å resolution eLife Medium 24913268
2015 L22 (PF3D7_0821700) was incorporated into atomic models built from cryo-EM reconstructions of P. falciparum 80S ribosomes purified from blood-stage schizonts, confirming its structural presence in the large subunit of the translating ribosome. Cryo-EM reconstructions at sub-nanometer resolution with flexible fitting of atomic models from P. falciparum schizont-purified ribosomes Nucleic acids research Medium 26432834
2025 L22 (PF3D7_0821700) is present as a structural component of the native P. falciparum 80S ribosome in actively translating states, as visualized in situ inside infected human erythrocytes by high-resolution cryo-electron tomography. In situ cryo-electron tomography of P. falciparum-infected human erythrocytes; eight high-resolution structures of the native malarial ribosome in actively translating states Nature structural & molecular biology Medium 40825879

Source papers

Stage 0 corpus · 6 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine. eLife 272 24913268
2017 Mefloquine targets the Plasmodium falciparum 80S ribosome to inhibit protein synthesis. Nature microbiology 136 28288098
2006 In vitro efficacy, resistance selection, and structural modeling studies implicate the malarial parasite apicoplast as the target of azithromycin. The Journal of biological chemistry 125 17110371
2015 Dynamical features of the Plasmodium falciparum ribosome during translation. Nucleic acids research 45 26432834
2025 Integrated structural biology of the native malarial translation machinery and its inhibition by an antimalarial drug. Nature structural & molecular biology 7 40825879
2025 Antimalarial drug artemisinin stabilizes PfRACK1 binding to the ribosome. Structure (London, England : 1993) 3 40480224