Affinage · Plasmodium

PF3D7_0719600

60S ribosomal protein L11a, putative

Annotated
2026-09-08
5 papers in source corpus 4 papers cited in narrative 4 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_0719600 (L11a) is a structural component of the large (60S) subunit of the Plasmodium falciparum cytoplasmic 80S ribosome, established by successive cryo-EM structures of the purified ribosome (PMID:24913268, PMID:26432834) and confirmed in the native context of actively translating ribosomes inside infected human erythrocytes by in situ cryo-electron tomography (PMID:40825879). Within these structures the 80S ribosome harbors a druggable GTPase-associated centre on the large subunit that serves as the mefloquine binding site, though this drug-binding role is attributed to the large subunit as a whole rather than to L11a specifically (PMID:28288098). Beyond its membership in the 60S subunit as resolved by these structural studies, no specific enzymatic activity, binding partner, post-translational modification, or individual functional role has been mechanistically established for L11a itself in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2014 Medium

    Whether L11a is a bona fide constituent of the P. falciparum ribosome was first answered by resolving it within a high-resolution structure of the assembled 80S ribosome, placing it in the large (60S) subunit.

    Evidence Cryo-EM structure of the P. falciparum 80S ribosome at 3.2 Å resolution

    PMID:24913268

    Open questions at the time
    • L11a is resolved only as part of the complex and is not individually isolated or functionally validated
    • No enzymatic activity or specific binding partner assigned to L11a itself
  2. 2015 Medium

    The assignment of L11a to the 60S subunit was corroborated across multiple ribosome conformations purified from blood-stage parasites, strengthening its status as a stable structural component.

    Evidence Five cryo-EM reconstructions with flexibly fitted atomic models from schizont-purified ribosomes

    PMID:26432834

    Open questions at the time
    • L11a not characterized beyond complex membership
    • No stage-specific or functional role distinguished for L11a
  3. 2017 Medium

    Placing L11a within a structure that also mapped the antimalarial mefloquine binding site clarified that the druggable GTPase-associated centre lies on the large subunit, but did not attribute this drug interaction to L11a itself.

    Evidence Cryo-EM structure at 3.2 Å with mutagenesis of ribosome-binding residues to confirm the mefloquine mechanism

    PMID:28288098

    Open questions at the time
    • Drug binding is a property of the large subunit, not demonstrated to involve L11a specifically
    • No direct L11a-mefloquine contact established
  4. 2025 Medium

    Whether L11a occupies the same position in functioning ribosomes in vivo was addressed by visualizing native, actively translating 80S ribosomes inside infected erythrocytes, confirming L11a in its cellular context during elongation.

    Evidence In situ cryo-electron tomography of P. falciparum-infected human erythrocytes yielding eight ribosome structures in translating elongation states

    PMID:40825879

    Open questions at the time
    • L11a is resolved only as a ribosomal component, not individually characterized
    • No functional contribution of L11a to elongation dynamics isolated

Open questions

Synthesis pass · forward-looking unresolved questions
  • No experiment in the available corpus assigns L11a an individual molecular activity, binding partner, post-translational modification, or non-structural function distinct from its membership in the 60S subunit.
  • No genetic or biochemical dissection of L11a-specific function
  • No interaction partners beyond the ribosome established for L11a
  • No post-translational modification or regulatory role characterized

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
P. falciparum cytoplasmic 80S ribosome (large 60S subunit)

Evidence

Reading pass · 4 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2014 PF3D7_0719600 (L11a) was resolved as a component of the P. falciparum 80S ribosome in the first cryo-EM structure of this ribosome at 3.2 Å resolution; the structure established membership of L11a in the large (60S) ribosomal subunit of the P. falciparum cytoplasmic ribosome. Cryo-EM structure determination at 3.2 Å resolution of the P. falciparum 80S ribosome eLife Medium 24913268
2015 PF3D7_0719600 (L11a) was identified as a structural component of the P. falciparum 80S ribosome through five cryo-EM reconstructions of ribosomes purified from blood-stage schizonts at sub-nanometer resolution, with atomic models built by flexible fitting. Cryo-EM reconstruction and atomic model building from P. falciparum schizont-purified ribosomes Nucleic acids research Medium 26432834
2017 PF3D7_0719600 (L11a) is a constituent of the P. falciparum 80S ribosome structural context resolved at 3.2 Å by cryo-EM, within which the GTPase-associated centre (on the large subunit) was identified as the binding site for mefloquine. Cryo-EM structure at 3.2 Å; mutagenesis of ribosome-binding residues to confirm drug mechanism Nature microbiology Medium 28288098
2025 PF3D7_0719600 (L11a) is a structural component of the native P. falciparum 80S ribosome visualized in actively translating states inside infected human erythrocytes by in situ cryo-electron tomography; eight high-resolution structures of the ribosome in elongation states were determined, placing L11a in its native cellular context during active translation. In situ cryo-electron tomography of P. falciparum-infected human erythrocytes; eight high-resolution ribosome structures in translating states Nature structural & molecular biology Medium 40825879

Source papers

Stage 0 corpus · 5 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine. eLife 272 24913268
2017 Mefloquine targets the Plasmodium falciparum 80S ribosome to inhibit protein synthesis. Nature microbiology 136 28288098
2015 Dynamical features of the Plasmodium falciparum ribosome during translation. Nucleic acids research 45 26432834
2025 Integrated structural biology of the native malarial translation machinery and its inhibition by an antimalarial drug. Nature structural & molecular biology 7 40825879
2025 Antimalarial drug artemisinin stabilizes PfRACK1 binding to the ribosome. Structure (London, England : 1993) 3 40480224