Affinage · Plasmodium

PF3D7_0619700

F-box protein FBXO1, putative

Annotated
2026-09-08
4 papers in source corpus 4 papers cited in narrative 7 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

FBXO1 (PF3D7_0619700) is the substrate-recognition F-box subunit of a conserved SCF (SKP1–Cullin1–FBXO1) E3 ubiquitin ligase in Plasmodium that governs inner membrane complex (IMC) biogenesis and cell division across asexual and sexual life-cycle stages (PMID:36898988, PMID:38416790). In P. falciparum the protein assembles into a functional SCF complex (PfCullin-1, PfRbx1, PfSkp1, PfFBXO1, and calcyclin-binding protein) with demonstrated in vitro ubiquitination activity, with PfSKP1 as its stable interacting partner (PMID:38416790, PMID:39915671). FBXO1 localizes to the apical region of dividing merozoites and transitions to an IMC-like distribution during segmentation, and occupies a unilateral IMC region in gametocytes, tying its position to IMC assembly (PMID:39915671). Inducible depletion in P. falciparum causes abnormal segmentation and karyokinesis yielding inviable merozoites, and malformed gametocytes that fail to mature (PMID:39915671); in P. berghei, loss of the SCF^FBXO1 complex disrupts nuclear segregation during schizogony, centrosome partitioning during microgametogenesis, gamete egress, and apical/IMC integrity (PMID:36898988). Its ubiquitination activity intersects with CDPK1-mediated phosphorylation signaling (PMID:36898988). The identity of FBXO1's ubiquitination substrates and the biochemical basis of the FBXO1–CDPK1 link have not been resolved in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2020 Low

    Before mechanism could be probed, a tool was needed to deplete FBXO1 in the stages where it acts; tagging the fbxo1 product with an auxin-inducible degron established that the protein is expressed in schizonts and gametocytes and can be conditionally degraded.

    Evidence CRISPR/Cas9 AID tagging with auxin-induced degradation confirmed by western blot in P. yoelii

    PMID:33307135

    Open questions at the time
    • No downstream FBXO1-specific phenotype reported
    • Does not establish complex membership or enzymatic activity
    • Single-method demonstration
  2. 2023 High

    It was unknown whether FBXO1 functions as an E3 ligase in vivo and what cellular processes it controls; genetic depletion combined with ubiquitinomics showed it forms a functional SCF^FBXO1 complex essential for nuclear segregation, centrosome partitioning, gamete egress, and apical/IMC integrity.

    Evidence Conditional knockdown, ubiquitinomic mass spectrometry, and stage-resolved immunofluorescence in P. berghei

    PMID:36898988

    Open questions at the time
    • Specific ubiquitination substrates not defined
    • No structural model of the complex
    • Mechanism linking ubiquitination to IMC integrity unresolved
  3. 2023 Medium

    How FBXO1 activity integrates with other regulatory signals was unknown; comparing ubiquitinome and phosphoproteome upon FBXO1 depletion revealed an interplay between SCF^FBXO1 ubiquitination and CDPK1-mediated phosphorylation.

    Evidence Ubiquitinomic profiling in FBXO1-depleted parasites combined with phosphoproteomics in P. berghei

    PMID:36898988

    Open questions at the time
    • No direct biochemical reconstitution of the FBXO1–CDPK1 link
    • Directionality of the ubiquitination/phosphorylation crosstalk unclear
    • Shared substrates not defined
  4. 2024 High

    Whether the human-pathogen species retains the same complex and enzymatic activity was untested; reconstitution and interaction assays confirmed PfFBXO1 is part of a functional PfSCF complex with in vitro ubiquitination activity.

    Evidence Co-immunoprecipitation, in vitro protein–protein interaction assay, and in vitro ubiquitination assay in P. falciparum

    PMID:38416790

    Open questions at the time
    • Physiological substrates of the ligase not identified
    • Role of calcyclin-binding protein in substrate selection unknown
  5. 2025 High

    The subcellular basis of FBXO1 function was unresolved; imaging showed it localizes apically in dividing merozoites and transitions to an IMC-like distribution and a unilateral IMC region in gametocytes, and inducible knockout produced abnormal segmentation/karyokinesis and immature gametocytes, tying FBXO1 to IMC-dependent division in both asexual and sexual stages.

    Evidence Epitope-tagged live/immunofluorescence imaging, inducible knockout with morphological/viability assays and Co-IP/MS in P. falciparum

    PMID:39915671

    Open questions at the time
    • Mechanism recruiting FBXO1 to the apical/IMC scaffold unknown
    • Co-purifying IMC proteins not validated as ubiquitination substrates
    • PfSKP1 interaction not reciprocally validated in this study

Open questions

Synthesis pass · forward-looking unresolved questions
  • The direct ubiquitination substrates of FBXO1 at the IMC scaffold and the biochemical mechanism coupling its ligase activity to CDPK1 phosphorylation signaling remain to be defined.
  • No validated in vivo ubiquitination substrate
  • No structural model of substrate recognition
  • Mechanistic basis of ubiquitination/phosphorylation crosstalk unresolved

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
PfSCF complex (PfCullin-1, PfRbx1, PfSkp1, PfFBXO1, calcyclin-binding protein)SCF^FBXO1 E3 ubiquitin ligase complex (SKP1–Cullin1–FBXO1)

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2023 In Plasmodium berghei, FBXO1 forms a functional SKP1/Cullin1/FBXO1 (SCF^FBXO1) E3 ubiquitin ligase complex; this complex is required for nuclear segregation during schizogony and centrosome partitioning during microgametogenesis, gamete egress from host erythrocytes, and integrity of the apical complex and inner membrane complex (IMC) in merozoites and ookinetes. Conditional knockdown/genetic manipulation, ubiquitinomic mass spectrometry, immunofluorescence localization across developmental stages Nature communications High 36898988
2023 In Plasmodium berghei, FBXO1-dependent ubiquitination intersects with phosphorylation by calcium-dependent protein kinase 1 (CDPK1), establishing a regulatory interplay between SCF^FBXO1-mediated ubiquitination and CDPK1-mediated phosphorylation. Ubiquitinomic profiling in FBXO1-depleted parasites combined with phosphoproteomics Nature communications Medium 36898988
2024 In Plasmodium falciparum, FBXO1 (PfFBXO1) is a component of a functional SCF complex (PfSCF) comprising PfCullin-1, PfRbx1, PfSkp1, PfFBXO1, and calcyclin binding protein, confirmed to have E3 ubiquitin ligase activity. Co-immunoprecipitation, in vitro protein–protein interaction assay, in vitro ubiquitination assay PLoS pathogens High 38416790
2025 PfFBXO1 (PF3D7_0619700) localizes initially to the apical region of dividing P. falciparum merozoites and transitions to an IMC-like localization as segmentation progresses; it also localizes to the IMC region unilaterally in gametocytes, directly linking its subcellular position to IMC biogenesis. Live/immunofluorescence imaging across asexual and gametocyte stages following epitope tagging Communications biology Medium 39915671
2025 Inducible knockout of PfFBXO1 in P. falciparum causes abnormal segmentation and karyokinesis, producing inviable daughter merozoites, and results in abnormally shaped gametocytes that fail to fully mature, demonstrating an essential role in both asexual IMC-dependent cytokinesis and sexual stage development. Inducible knockout (conditional genetics), morphological and viability assays, flow cytometry Communications biology High 39915671
2025 Proteomic analysis of PfFBXO1 immunoprecipitates identified PfSKP1 as a stable interacting partner, and multiple IMC pellicle and membrane proteins as co-purifying partners, consistent with PfFBXO1 functioning at the IMC scaffold. Co-immunoprecipitation followed by mass spectrometry (proteomic interactome) Communications biology Medium 39915671
2020 In Plasmodium yoelii, the fbxo1 gene product was successfully tagged with an auxin-inducible degron (AID) motif enabling conditional proteasomal degradation, confirming the protein is expressed in asexual schizont and sexual gametocyte stages and can be depleted in those stages using auxin. CRISPR/Cas9 genome editing to introduce AID tag; auxin-induced degradation confirmed by western blot Molecular and biochemical parasitology Low 33307135

Source papers

Stage 0 corpus · 4 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2023 The Skp1-Cullin1-FBXO1 complex is a pleiotropic regulator required for the formation of gametes and motile forms in Plasmodium berghei. Nature communications 16 36898988
2024 Plasmodium falciparum contains functional SCF and CRL4 ubiquitin E3 ligases, and CRL4 is critical for cell division and membrane integrity. PLoS pathogens 12 38416790
2020 Generation of Plasmodium yoelii malaria parasite for conditional degradation of proteins. Molecular and biochemical parasitology 11 33307135
2025 PfFBXO1 is essential for inner membrane complex formation in Plasmodium falciparum during both asexual and transmission stages. Communications biology 5 39915671