Affinage · Plasmodium

ROM10

PF3D7_0618600 · rhomboid protease ROM10

Annotated
2026-09-08
5 papers in source corpus 3 papers cited in narrative 3 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ROM10 (PF3D7_0618600) is a rhomboid intramembrane protease family member whose loss-of-function studies indicate it is dispensable for parasite life cycle progression: systematic gene deletion in P. berghei produced parasites with no major defects across blood, mosquito, and liver stages under standard laboratory conditions (PMID:23490234). In P. falciparum, N-terminal 3xHA tagging of ROM10 is deleterious and blocks recovery of drug-resistant parasites, so that inducible knockout was achievable only with constructs lacking the N-terminal tag, establishing that the N-terminal region is functionally important (PMID:39739757). In P. berghei gametocytes, the ROM10 transcript associates with the translational repressors DOZI and CITH, placing it within the maternal repressome and indicating the mRNA is stored in a translationally repressed state for post-fertilization use (PMID:25418785). Beyond these observations, no substrate, catalytic activity, subcellular localization, or interacting protease complex has been characterized for ROM10 itself in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2013 Medium

    To ask whether ROM10 is required for parasite survival, its gene was deleted and the resulting parasites were assessed across the life cycle, establishing that ROM10 is not essential under laboratory conditions.

    Evidence Systematic reverse-genetics gene deletion with phenotypic assessment across blood, mosquito, and liver stages in P. berghei

    PMID:23490234

    Open questions at the time
    • Dispensability under standard conditions does not exclude a stage-specific or stress-conditional role
    • No substrate, catalytic activity, or localization determined
    • Findings in P. berghei may not transfer to P. falciparum
  2. 2014 Low

    To understand how ROM10 expression is timed, its transcript was tested for association with maternal repressors, showing it is stored translationally repressed in gametocytes for later developmental deployment.

    Evidence RIP-Chip using DOZI and CITH as bait in P. berghei gametocytes

    PMID:25418785

    Open questions at the time
    • Single RIP experiment without functional validation of ROM10 protein activity
    • Timing and trigger of translational de-repression not defined
    • Does not establish what ROM10 protein does post-fertilization
  3. 2025 Low

    To probe the functional importance of ROM10's N-terminus, tagging and inducible knockout were attempted, revealing that N-terminal modification impairs ROM10 function.

    Evidence SHIFTiKO inducible knockout with DiCre-lox and N-terminal 3xHA tag constructs in P. falciparum; failure to recover parasites carrying the N-terminal tag

    PMID:39739757

    Open questions at the time
    • Inference rests on failure to recover tagged parasites, an indirect readout without mechanistic follow-up
    • Why the N-terminus is required (folding, localization, catalysis) is unresolved
    • No direct assay of ROM10 protease activity

Open questions

Synthesis pass · forward-looking unresolved questions
  • The catalytic substrate, protease activity, subcellular localization, and physiological role of ROM10 itself remain undefined.
  • No substrate identified for ROM10
  • No demonstration of intramembrane protease activity for ROM10 specifically
  • No localization or interacting-complex data for ROM10

Mechanism profile

Synthesis pass · controlled-vocabulary classification

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2013 ROM10 is dispensable for asexual blood stage development in P. berghei; gene deletion of ROM10 produced parasites with no major phenotypic defects in blood stages, mosquito stages, or liver stages, indicating ROM10 is not essential for life cycle progression under standard laboratory conditions. Systematic gene deletion (reverse genetics / loss-of-function) in P. berghei with phenotypic assessment across life cycle stages Molecular microbiology Medium 23490234
2025 N-terminal 3xHA tagging of ROM10 (PF3D7_0618600) was deleterious in P. falciparum, preventing recovery of drug-resistant parasites; successful SHIFTiKO knockout was achieved only with constructs lacking the N-terminal tag, establishing that N-terminal modification impairs ROM10 function. SHIFTiKO (frameshift-based inducible knockout) with DiCre-lox system; transfection with and without N-terminal 3xHA tag constructs in P. falciparum Nucleic acids research Low 39739757
2014 In P. berghei gametocytes, ROM10 mRNA (PBANKA_111780) is associated with the translational repressors DOZI and CITH, placing it in the maternal repressome and indicating its transcript is stored in a translationally repressed state for use during post-fertilization development. RNA immunoprecipitation coupled to microarray analysis (RIP-Chip) using DOZI and CITH as bait proteins Genome biology Low 25418785

Source papers

Stage 0 corpus · 5 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2006 Two Plasmodium rhomboid proteases preferentially cleave different adhesins implicated in all invasive stages of malaria. PLoS pathogens 180 17040128
2013 Loss-of-function analyses defines vital and redundant functions of the Plasmodium rhomboid protease family. Molecular microbiology 41 23490234
2025 A scaleable inducible knockout system for studying essential gene function in the malaria parasite. Nucleic acids research 0 39739757
2017 Targeted Deletion of a Plasmodium Site-2 Protease Impairs Life Cycle Progression in the Mammalian Host. PloS one 0 28107409
2014 Genome-wide RIP-Chip analysis of translational repressor-bound mRNAs in the Plasmodium gametocyte. Genome biology 0 25418785