Affinage · Plasmodium

NUP637

PF3D7_0609000 · nucleoporin NUP637, putative

Annotated
2026-09-08
6 papers in source corpus 3 papers cited in narrative 3 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

NUP637 (PF3D7_0609000) is a putative phenylalanine-glycine (FG) nucleoporin of the Plasmodium nuclear pore complex, established primarily through its association with other NPC components rather than through direct functional study (PMID:36040030). In P. berghei, NUP637 was verified by TurboID proximity labeling and mass spectrometry as an interaction partner of the NPC scaffold nucleoporin NUP313, placing it within the nuclear pore complex (PMID:36040030). In P. falciparum gametocytes, NUP637 co-purified with a multiprotein complex containing the NPC constituents NUP313, NUP138, and NUP176 (PMID:41986327). Beyond this membership in the nuclear pore complex, no direct enzymatic activity, structure, imaging-based localization, or loss-of-function phenotype has been experimentally established for NUP637 itself in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2018 Low

    The question of whether PF3D7_0609000 belongs to the Plasmodium nuclear pore machinery was first addressed by cataloguing candidate nucleoporins, positioning NUP637 as a putative FG-nucleoporin.

    Evidence Bioinformatic identification of NPC components in P. berghei with FG-repeat prediction and P. falciparum ortholog assignment

    PMID:30050042

    Open questions at the time
    • Prediction only — NUP637 itself was not directly tagged or localized in this study
    • FG-repeat content inferred computationally, not verified biochemically
    • No functional role assigned
  2. 2022 Medium

    Whether NUP637 physically associates with the NPC scaffold was tested directly, confirming it as a proximity partner of NUP313 within the nuclear pore complex.

    Evidence TurboID proximity labeling, affinity purification, and mass spectrometry in P. berghei

    PMID:36040030

    Open questions at the time
    • Proximity labeling from a single lab and single method; no reciprocal validation
    • Does not establish direct binding versus co-proximity within the NPC
    • No functional characterization of NUP637 itself
  3. 2026 Low

    Whether NUP637 associates with other NPC constituents in a distinct life-cycle stage was addressed in P. falciparum gametocytes, showing it co-purifies with a complex containing NUP313, NUP138, and NUP176.

    Evidence Co-immunoprecipitation coupled to mass spectrometry (IP-MS) in P. falciparum gametocytes

    PMID:41986327

    Open questions at the time
    • Single Co-IP/MS result; NUP637 is one of many co-purified proteins
    • No demonstration that NUP637 is required for the complex or for gametocyte biology
    • Relationship to the cryptochrome-like protein PfDPL bait not resolved for NUP637 specifically

Open questions

Synthesis pass · forward-looking unresolved questions
  • No direct enzymatic activity, structure, imaging-based localization, or loss-of-function phenotype has been established for NUP637 itself; its specific role within the nuclear pore complex remains uncharacterized.
  • No direct subcellular imaging of NUP637
  • No genetic knockout or knockdown phenotype
  • No structural or biochemical characterization of its FG repeats or barrier function

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
Nuclear pore complex (with NUP313, NUP138, NUP176)

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2022 NUP637 (PF3D7_0609000) was verified as an interaction partner of the P. berghei NPC scaffold nucleoporin NUP313 by TurboID proximity labeling followed by affinity purification and mass spectrometry, placing NUP637 as a putative phenylalanine-glycine (FG) nucleoporin within the Plasmodium nuclear pore complex. TurboID proximity labeling, affinity purification, mass spectrometry mBio Medium 36040030
2018 NUP637 was identified bioinformatically as a putative nucleoporin component of the P. berghei nuclear pore complex, predicted to contain phenylalanine-glycine repeats, and assigned an ortholog in P. falciparum; it was listed among Nups with potential nuclear periphery localization. Bioinformatic identification; genetic/fluorescence tagging of selected NPC components in P. berghei (NUP637 itself was not directly tagged in this study) Scientific reports Low 30050042
2026 NUP637 (PF3D7_0609000) co-purified with PfDPL (a cryptochrome-like protein) in P. falciparum gametocytes by co-immunoprecipitation/mass spectrometry, placing NUP637 among nuclear-pore constituents physically associated with a multiprotein complex that also includes NUP313, NUP138, and NUP176. Co-immunoprecipitation coupled to mass spectrometry (IP-MS) Nature communications Low 41986327

Source papers

Stage 0 corpus · 6 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2018 Nuclear Pore Complex Components in the Malaria Parasite Plasmodium berghei. Scientific reports 20 30050042
2022 TurboID Identification of Evolutionarily Divergent Components of the Nuclear Pore Complex in the Malaria Model Plasmodium berghei. mBio 14 36040030
2026 A heterologous marker-free selection approach for CRISPR/Cas9-based gene editing in the malaria parasite Plasmodium falciparum. mSphere 0 41885428
2026 GID/CTLH E3 ligase complex control cell fate programs for sexual development of Plasmodium falciparum. Nature communications 0 41986327
2024 Nuclear pore complexes undergo Nup221 exchange during blood-stage asexual replication of Plasmodium parasites. mSphere 0 39526784
2021 Roles and Cellular Localization of GBP2 and NAB2 During the Blood Stage of Malaria Parasites. Frontiers in cellular and infection microbiology 0 34604117