Affinage · Plasmodium

MTR4

PF3D7_0602100 · ATP-dependent RNA helicase MTR4

Annotated
2026-09-08
4 papers in source corpus 1 papers cited in narrative 1 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_0602100 (MTR4) is annotated as a putative ATP-dependent RNA helicase in Plasmodium falciparum, but the available corpus contains no direct biochemical or functional characterization of the protein itself. The only gene-specific evidence places MTR4 within the PfMDR1 (PF3D7_0523000) interaction network based on Plasmodium interactome data (PMID:36582189). Beyond this network association (PMID:36582189), no enzymatic activity, RNA substrate, complex membership, localization, or phenotype has been characterized for PF3D7_0602100 in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 1 step
  1. 2022 Low

    To begin placing the uncharacterized helicase PF3D7_0602100 in a cellular context, it was asked whether the protein participates in any known interaction network, and interactome analysis linked it to PfMDR1.

    Evidence protein-protein interaction network analysis using Plasmodium interactome data in P. falciparum

    PMID:36582189

    Open questions at the time
    • Single computational interactome dataset with no direct biochemical validation of the MTR4-MDR1 interaction
    • No demonstration that PF3D7_0602100 has ATP-dependent RNA helicase activity
    • No RNA substrate, complex membership, or cellular localization established for the protein itself

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether PF3D7_0602100 possesses ATP-dependent RNA helicase activity, acts in nuclear RNA quality control, and functionally interacts with PfMDR1 remains entirely unestablished by direct experiment.
  • No biochemical assay of helicase or ATPase activity
  • No identification of RNA substrates or partner complexes
  • No knockout, knockdown, or localization data for the protein

Mechanism profile

Synthesis pass · controlled-vocabulary classification

Evidence

Reading pass · 1 per-paper finding extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2022 PF3D7_0602100 (MTR4) was identified as a protein that interacts with PfMDR1 (PF3D7_0523000) based on Plasmodium interactome data, placing MTR4 within the MDR1 interaction network. Protein-protein interaction network analysis using Plasmodium interactome data (Hillier et al., 2019) Current research in microbial sciences Low 36582189

Source papers

Stage 0 corpus · 4 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2015 A bioinformatic survey of RNA-binding proteins in Plasmodium. BMC genomics 62 26525978
1968 DNA, RNA , and protein synthesis in erythrocytic forms of Plasmodium knowlesi. The American journal of tropical medicine and hygiene 56 4971014
2022 Combining IP3 affinity chromatography and bioinformatics reveals a novel protein-IP3 binding site on Plasmodium falciparum MDR1 transporter. Current research in microbial sciences 0 36582189
2015 DEAD/DExH-Box RNA Helicases in Selected Human Parasites. The Korean journal of parasitology 0 26537038