Affinage · Plasmodium

AKAL

PF3D7_0512900 · AKAP-like protein

Annotated
2026-09-07
3 papers in source corpus 1 papers cited in narrative 5 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

AKAL (PF3D7_0512900) is an atypical AKAP-like protein of Plasmodium falciparum expressed in mature asexual stages, merozoites, and gametocytes (PMID:27129434). Despite its AKAP-like designation, AKAL does not anchor the PKA regulatory subunit directly; instead it binds Pf14-3-3I, which in turn associates with PfPKA-R, placing AKAL only indirectly within the PKA signaling network (PMID:27129434). AKAL is itself not a PKA substrate in vitro, whereas its partners Pf14-3-3I and PfPKA-R are phosphorylated by PKA, indicating that regulation of this assembly acts on the partners rather than on AKAL (PMID:27129434). Consistent with a non-canonical role, AKAL harbors a conserved nucleotide-binding pocket that binds AMP and cAMP, pointing toward a function in cAMP/AMP-related metabolism or signaling rather than classical PKA anchoring (PMID:27129434). Beyond these interaction and biochemical observations, no functional phenotype or in vivo role for AKAL has been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2016 Medium

    Establishing where and when AKAL is present was needed before any functional role could be assigned; expression was mapped across parasite life-cycle stages.

    Evidence RT-qPCR and immunofluorescence in P. falciparum 3D7

    PMID:27129434

    Open questions at the time
    • No functional consequence tied to the observed stage expression or localization
    • Subcellular localization not resolved to a specific compartment
  2. 2016 Medium

    The central question was whether an AKAP-like protein anchors PKA in P. falciparum; interaction studies showed AKAL does not bind PfPKA-R directly but connects via Pf14-3-3I, redefining it as an atypical, indirect participant in PKA signaling.

    Evidence Reciprocal pull-downs with recombinant AKAL, proteomic identification, and IFA colocalization in P. falciparum 3D7

    PMID:27129434

    Open questions at the time
    • Functional significance of the AKAL–Pf14-3-3I interaction in vivo not tested
    • Stoichiometry and interface of the AKAL–Pf14-3-3I–PfPKA-R assembly unresolved
  3. 2016 Medium

    To probe how the complex is regulated, phosphorylation was tested; AKAL is not a PKA substrate whereas Pf14-3-3I and PfPKA-R are, implying control acts on the partners rather than AKAL itself.

    Evidence Radiolabel in vitro kinase assay

    PMID:27129434

    Open questions at the time
    • In vitro result not confirmed in cellular context
    • Whether AKAL is modified by other kinases untested
  4. 2016 Low

    Whether AKAL has an intrinsic biochemical activity beyond scaffolding was addressed by identifying a nucleotide-binding pocket that binds AMP and cAMP, hinting at a role in cAMP/AMP metabolism or signaling.

    Evidence Qualitative nucleotide-binding experiments supported by a computational structural model

    PMID:27129434

    Open questions at the time
    • Qualitative binding not validated by quantitative affinity or enzymatic assays
    • No demonstrated catalytic or signaling output from nucleotide binding
    • Structural pocket inferred from modeling, not an experimental structure

Open questions

Synthesis pass · forward-looking unresolved questions
  • The in vivo role of AKAL, the functional consequence of its AMP/cAMP binding, and its contribution to parasite biology remain unresolved.
  • No genetic knockout or knockdown phenotype for AKAL reported
  • No demonstrated link between nucleotide binding and a metabolic or signaling pathway
  • No experimental structure of AKAL or its complexes

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Partners
Complex memberships
AKAL–Pf14-3-3I–PfPKA-R indirect assembly

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2016 AKAL (PF3D7_0512900) is expressed in mature asexual stages, merozoites, and gametocytes of P. falciparum 3D7, as determined by RT-qPCR and immunofluorescence assays. RT-qPCR and immunofluorescence assay Malaria journal Medium 27129434
2016 AKAL (PF3D7_0512900) does NOT interact directly with the P. falciparum PKA regulatory subunit (PfPKA-R); instead, AKAL binds Pf14-3-3I, which in turn interacts with PfPKA-R, establishing an indirect connection to PKA signaling. Pull-down experiments with recombinant AKAL protein and parasite protein extracts, biochemical and proteomic approaches, immunofluorescence colocalization Malaria journal Medium 27129434
2016 AKAL (PF3D7_0512900) is NOT phosphorylated by PKA in vitro, whereas its binding partner Pf14-3-3I and PfPKA-R are phosphorylated by PKA, indicating that phosphorylation of the complex components (but not AKAL itself) may regulate these interactions. Radiolabel in vitro kinase activity assay Malaria journal Medium 27129434
2016 AKAL (PF3D7_0512900) binds nucleotides AMP and cAMP, as demonstrated by qualitative nucleotide binding experiments and structural modeling that revealed a conserved nucleotide-binding pocket, suggesting possible involvement in AMPK pathway or phosphodiesterase-associated activities. Structural modeling and qualitative nucleotide binding experiments Malaria journal Low 27129434
2016 AKAL (PF3D7_0512900) shares 23% sequence identity with the central domain of human AKAP18δ but represents an atypical AKAP in that it does not anchor PKA-R directly; instead PKA localization in P. falciparum may involve other partners. Sequence alignment and biochemical interaction studies Malaria journal Low 27129434

Source papers

Stage 0 corpus · 3 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2015 The Stapled AKAP Disruptor Peptide STAD-2 Displays Antimalarial Activity through a PKA-Independent Mechanism. PloS one 16 26010880
2016 PKA and Apicomplexan Parasite Diseases. Hormone and metabolic research = Hormon- und Stoffwechselforschung = Hormones et metabolisme 9 27835919
2016 Characterization of an A-kinase anchoring protein-like suggests an alternative way of PKA anchoring in Plasmodium falciparum. Malaria journal 6 27129434