Affinage · Plasmodium

SRSF12

PF3D7_0503300 · serine/arginine-rich splicing factor 12

Annotated
2026-09-08
2 papers in source corpus 1 papers cited in narrative 2 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_0503300 (SRSF12) is a serine/arginine-rich splicing factor of Plasmodium falciparum that localizes predominantly to the nucleus of blood stage trophozoites and is also present in the nucleus of gametocytes (PMID:25188378). Its RS-rich domain is a direct in vitro substrate of all four P. falciparum CLK kinases (PfCLK-1 through -4), and this phosphorylation strictly requires the RS domain, positioning SRSF12 as a downstream target of CLK-mediated regulation of pre-mRNA processing (PMID:25188378). Beyond its nuclear localization and CLK-dependent RS-domain phosphorylation, no further mechanistic detail — including RNA targets, splicing activity, or interaction partners — has been characterized for SRSF12 in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 2 steps
  1. 2014 Medium

    To establish where SRSF12 could act, its subcellular distribution was resolved, showing a nuclear residence consistent with a role in pre-mRNA processing across asexual and sexual stages.

    Evidence Immunolocalization and subcellular fractionation in P. falciparum blood stage trophozoites and gametocytes

    PMID:25188378

    Open questions at the time
    • No RNA substrates or splicing targets identified
    • No interaction partners or spliceosome association demonstrated
    • Localization not resolved across all life-cycle stages
  2. 2014 High

    To connect SRSF12 to an upstream regulatory kinase, its RS-rich domain was tested as a phosphorylation substrate, establishing it as a direct in vitro target of all four PfCLK kinases and defining the RS domain as the required phosphoacceptor region.

    Evidence In vitro kinase assay with recombinant RS-domain-containing PfSRSF12 and recombinant PfCLK-1 through -4, using an RS-domain-lacking control peptide

    PMID:25188378

    Open questions at the time
    • Phosphorylation not demonstrated in vivo in the parasite
    • Functional consequence of RS-domain phosphorylation on splicing activity unknown
    • Which specific residues within the RS domain are phosphorylated is not mapped

Open questions

Synthesis pass · forward-looking unresolved questions
  • It remains unknown what RNA transcripts SRSF12 processes, whether its CLK-dependent phosphorylation regulates its activity or localization in vivo, and what role it plays in asexual proliferation or gametocyte development.
  • No in vivo functional or genetic characterization of SRSF12
  • No defined splicing targets or transcriptome-level effect
  • No structural model of the SRSF12–CLK interaction

Mechanism profile

Synthesis pass · controlled-vocabulary classification

Evidence

Reading pass · 2 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2014 PfSRSF12 (PF3D7_0503300) is localized predominantly to the nucleus of blood stage trophozoites and is also detectable in the nucleus of gametocytes, as determined by immunolocalization experiments. Immunolocalization / subcellular fractionation in P. falciparum blood stages and gametocytes PloS one Medium 25188378
2014 Recombinantly expressed PfSRSF12 (PF3D7_0503300) RS-rich domain is phosphorylated in vitro by all four PfCLK kinases (PfCLK-1, -2, -3, -4); a control peptide lacking the RS-rich domain was not phosphorylated, demonstrating that the RS domain is required for phosphorylation. In vitro kinase assay using recombinant RS-domain-containing PfSRSF12 protein and recombinant PfCLK-1 through -4 PloS one High 25188378

Source papers

Stage 0 corpus · 2 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Inhibition of the SR protein-phosphorylating CLK kinases of Plasmodium falciparum impairs blood stage replication and malaria transmission. PloS one 32 25188378
2019 Alternative Splicing in Apicomplexan Parasites. mBio 0 30782661