Affinage · Plasmodium

APH

PF3D7_0414600 · acylated pleckstrin-homology domain-containing protein, putative

Annotated
2026-09-08
10 papers in source corpus 5 papers cited in narrative 5 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

APH (PF3D7_0414600) is a lipid-sensing protein anchored to the surface of micronemes that provides spatial control for microneme exocytosis during apicomplexan host-cell invasion (PMID:29910186, PMID:31492901). Its pleckstrin-homology domain directly senses phosphatidic acid (PA): structural and functional dissection showed that APH inserts into lipid bilayers and clusters multiple PA head-groups at its binding surface, defining a conserved PA-sensing hub (PMID:29910186). Surface anchoring is achieved through N-terminal lipid modification, with APH confirmed as an N-myristoyltransferase substrate that is myristoylated at its N-terminal glycine in P. falciparum (PMID:34695132). Functionally, inducible deletion in P. yoelii established that APH is required for microneme exocytosis, erythrocyte invasion, and asexual growth: APH loss impaired secretion of the microneme protein MTRAP and reduced post-internalization echinocytosis, with APH colocalizing largely with MTRAP and less with AMA1, indicating a direct role in MTRAP secretion and only an indirect role in AMA1 secretion (PMID:34628068). APH marks micronemes independently of the HOPS/CORVET tethering machinery, as its apical localization persists when VPS16/VPS18 are depleted despite mislocalization of secreted microneme cargo (PMID:40198740). Beyond PA-sensing and its role positioning microneme fusion at the apical membrane, the corpus does not characterize additional binding partners or downstream fusion machinery for APH.

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2018 High

    Establishing how APH engages membranes answered whether the protein is a genuine lipid sensor, revealing a PA-recognition mechanism rather than a generic membrane anchor.

    Evidence Crystal structure of the APH PH domain with phospholipid-binding assays (largely in T. gondii, addressing conserved PfAPH hub)

    PMID:29910186

    Open questions at the time
    • Structural work performed primarily on TgAPH, not the P. falciparum protein directly
    • Does not establish the in vivo functional consequence of PA sensing
    • Downstream fusion partners engaged after PA binding not identified
  2. 2019 Medium

    Placing APH in the secretion sequence framed its PA-binding activity as the trigger initiating microneme membrane fusion at the apical plasma membrane, upstream of rhoptry discharge.

    Evidence APH localization and function cited as a mechanistic comparator framework within the RASP2 study

    PMID:31492901

    Open questions at the time
    • This paper cites prior APH work rather than generating new APH data
    • Temporal ordering relative to rhoptry discharge inferred, not directly measured for APH
    • PA generation source at the apical membrane not defined here
  3. 2021 High

    Inducible deletion answered whether APH is functionally required for invasion, demonstrating it is needed for microneme exocytosis and defining a direct role in MTRAP versus an indirect role in AMA1 secretion.

    Evidence DiCre inducible knockout in P. yoelii with secretion, invasion, echinocytosis, colocalization, and electron microscopy readouts

    PMID:34628068

    Open questions at the time
    • Molecular basis for differential MTRAP vs AMA1 dependence not resolved
    • Direct physical interaction between APH and MTRAP not shown
    • Performed in P. yoelii; not confirmed by equivalent P. falciparum knockout
  4. 2021 Medium

    Identifying the N-terminal modification answered how APH is targeted to the microneme surface, confirming N-myristoylation as the lipid anchor and APH as an NMT substrate.

    Evidence Chemical proteomics with YnMyr metabolic labeling, enrichment, and MS/MS of the modified N-terminal peptide, with NMT inhibitor control in P. falciparum

    PMID:34695132

    Open questions at the time
    • Single method for this specific protein
    • Whether myristoylation alone or combined with palmitoylation drives stable membrane anchoring not tested
    • Functional consequence of blocking APH myristoylation not directly measured
  5. 2025 Medium

    Testing APH localization under HOPS/CORVET depletion distinguished microneme biogenesis/surface anchoring from cargo delivery, showing APH surface anchoring is independent of the tethering complex even when secreted cargo is mislocalized.

    Evidence Conditional knockdown of VPS16/VPS18 with live imaging of APH-mCherry as a microneme surface marker in P. falciparum

    PMID:40198740

    Open questions at the time
    • APH used as a marker rather than the primary subject of perturbation
    • Machinery that delivers APH itself to the microneme surface not identified
    • Does not resolve how cargo mislocalization arises independently of APH anchoring

Open questions

Synthesis pass · forward-looking unresolved questions
  • How APH couples PA sensing to the downstream membrane-fusion machinery and to selective MTRAP secretion remains unresolved.
  • No direct APH binding partners or fusion effectors identified in the corpus
  • Mechanistic basis for direct MTRAP versus indirect AMA1 dependence unknown
  • P. falciparum-specific functional knockout phenotype not established

Mechanism profile

Synthesis pass · controlled-vocabulary classification

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2018 APH (PF3D7_0414600) contains a pleckstrin-homology domain that directly senses phosphatidic acid (PA); crystal structure of TgAPH resolved the atomic details of the PA-sensing hub, showing that APH inserts into lipid bilayers and clusters multiple phosphate head-groups at the bilayer binding surface. The key determinants of PA recognition were identified by structural and functional dissection. Crystal structure determination combined with functional interaction studies with phospholipid membranes (structural biology + lipid-binding assays) Structure (London, England : 1993) High 29910186
2021 APH (PF3D7_0414600) is required for microneme exocytosis in Plasmodium yoelii; inducible deletion of APH impaired secretion of the microneme proteins MTRAP and AMA1, reduced asexual growth and erythrocyte invasion, and reduced echinocytosis after merozoite internalization. APH largely colocalized with MTRAP but less with AMA1, indicating a direct role in MTRAP secretion and only an indirect role in AMA1 secretion. DiCre-based inducible knockout in P. yoelii with secretion assays (MTRAP, AMA1), invasion assays, IFA colocalization, and electron microscopy of tight junction formation Parasitology international High 34628068
2021 APH (PF3D7_0414600) undergoes N-myristoylation at its N-terminal glycine in P. falciparum; the modified N-terminal peptide was directly detected by chemical proteomics using the alkyne-myristate probe YnMyr and NMT inhibitor treatment, confirming APH as a substrate of N-myristoyl transferase (NMT). Chemical proteomics: metabolic labeling with alkyne-myristate (YnMyr) followed by enrichment and MS/MS identification of the modified N-terminal peptide; NMT inhibitor (IMP-1002) treatment as control PLoS biology Medium 34695132
2019 APH (PF3D7_0414600) localizes to the surface of micronemes and its PA-binding activity initiates membrane fusion for microneme exocytosis at the apical end of the parasite plasma membrane, where PA is generated prior to egress. This places APH upstream of rhoptry discharge in the sequential secretion pathway. Referenced as established prior work (cited as reference 27 in the RASP2 study); the RASP2 paper uses APH localization and function as a mechanistic comparator/framework Nature communications Medium 31492901
2025 APH (PF3D7_0414600) localizes apically in P. falciparum schizonts independently of HOPS/CORVET function; when HOPS/CORVET core subunits (VPS16, VPS18) were depleted, APH-mCherry retained its typical apical localization, indicating that microneme biogenesis (as marked by APH surface anchoring) is not disrupted by HOPS/CORVET depletion, even though secreted microneme cargo proteins were mislocalized. Conditional knockdown of HOPS/CORVET subunits combined with live fluorescence microscopy of APH-mCherry as a microneme surface/biogenesis marker PLoS pathogens Medium 40198740

Source papers

Stage 0 corpus · 10 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2018 Structural Basis of Phosphatidic Acid Sensing by APH in Apicomplexan Parasites. Structure (London, England : 1993) 17 29910186
2021 Distinct effects on the secretion of MTRAP and AMA1 in Plasmodium yoelii following deletion of acylated pleckstrin homology domain-containing protein. Parasitology international 2 34628068
2026 Physiology of invasive Plasmodium merozoites. Frontiers in cellular and infection microbiology 0 42211658
2026 A pleckstrin homology domain protein is involved in crystalloid formation in Plasmodium ookinetes and affects the maturation of infective sporozoites. Frontiers in cellular and infection microbiology 0 42233156
2025 HOPS/CORVET tethering complexes are critical for endocytosis and protein trafficking to invasion related organelles in malaria parasites. PLoS pathogens 0 40198740
2023 Targetome Analysis of Malaria Sporozoite Transcription Factor AP2-Sp Reveals Its Role as a Master Regulator. mBio 0 36622145
2021 Inhibition of protein N-myristoylation blocks Plasmodium falciparum intraerythrocytic development, egress and invasion. PLoS biology 0 34695132
2020 The ZIP Code of Vesicle Trafficking in Apicomplexa: SEC1/Munc18 and SNARE Proteins. mBio 0 33082261
2019 A lipid-binding protein mediates rhoptry discharge and invasion in Plasmodium falciparum and Toxoplasma gondii parasites. Nature communications 0 31492901
2018 Unraveling the Plasmodium vivax sporozoite transcriptional journey from mosquito vector to human host. Scientific reports 0 30111801