Affinage · Plasmodium

STOML

PF3D7_0318100 · stomatin-like protein, putative

Annotated
2026-09-07
3 papers in source corpus 3 papers cited in narrative 6 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_0318100 (STOML) is a mitochondrion-localized SPFH-family stomatin-like protein of Plasmodium falciparum that functions in asexual blood-stage (ABS) development (PMID:41662436). Endogenous epitope tagging places STOML at discrete puncta on branching points and endings of the ABS mitochondrial network rather than uniformly across the organelle (PMID:41662436), and stage-specific expression analysis shows it is present in trophozoites but not rings (PMID:12905716). Genetic deletion of STOML causes a significant growth defect and slowed ABS development while leaving sexual-stage development intact, defining a role restricted to the asexual cycle (PMID:41662436); knockout parasites are not sensitized to respiratory chain-targeting drugs, arguing against a role in respiratory chain assembly (PMID:41662436). STOML resides in a large protein complex, with pulldown mass spectrometry identifying the zinc-dependent metalloprotease FtsH as a likely partner, and an AlphaFold2 model resembling bacterial HflK/C — which forms a vault-like assembly around FtsH hexamers — points to an analogous STOML–FtsH mitochondrial complex (PMID:41662436). Beyond this complex membership and localization, the precise molecular activity of STOML has not been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2003 Low

    Establishing when STOML is expressed during the erythrocytic cycle was the first step toward defining its cellular context.

    Evidence RT-PCR cloning, prokaryotic expression and Western blot of a recombinant C-terminal fragment in P. falciparum FCC1/HN

    PMID:12905716

    Open questions at the time
    • No localization determined
    • No functional role assigned
    • Antigen detected only via recombinant fragment, not endogenous protein
  2. 2018 Low

    Whether the stomatin-like protein resides in the mitochondrion and is required for blood-stage growth was addressed in a rodent malaria model.

    Evidence Fluorescence microscopy localization and attempted gene deletion in P. berghei

    PMID:29669282

    Open questions at the time
    • Essentiality inferred indirectly from failed deletion, not from a conditional system
    • Species is P. berghei, not the subject P. falciparum gene
    • Sub-mitochondrial localization not resolved
  3. 2026 Medium

    The sub-organellar position and stage-specific requirement of P. falciparum STOML were resolved, establishing a defined ABS-restricted role.

    Evidence Endogenous epitope tagging with fluorescence microscopy and genetic deletion with growth/developmental readout in P. falciparum

    PMID:41662436

    Open questions at the time
    • Molecular reason for punctate localization at network branch points unknown
    • Mechanism linking loss of STOML to slowed asexual development not defined
  4. 2026 Low

    Whether STOML acts alone or within a complex, and whether it participates in respiratory chain assembly, was tested to narrow its molecular function.

    Evidence Pulldown/co-IP mass spectrometry, AlphaFold2 structural prediction, and drug-sensitivity assay on STOML-knockout P. falciparum

    PMID:41662436

    Open questions at the time
    • FtsH interaction from a single pulldown without reciprocal validation, mutagenesis, or reconstitution
    • HflK/C-like architecture is computational prediction only, no experimental structure
    • Functional consequence of the STOML–FtsH complex undetermined

Open questions

Synthesis pass · forward-looking unresolved questions
  • The biochemical activity of STOML within the proposed FtsH complex and how it contributes to asexual blood-stage growth remain unresolved.
  • No demonstrated enzymatic or scaffolding activity
  • Stoichiometry and architecture of the STOML–FtsH assembly not experimentally determined
  • Mechanistic basis of the growth defect not established

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
Large STOML-containing complex including the zinc-dependent metalloprotease FtsH (likely, single pulldown) [#2]

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2026 P. falciparum STOML (PF3D7_0318100) localizes to distinct puncta at branching points and endings of the asexual blood-stage (ABS) mitochondrial network, as determined by epitope tagging of endogenous STOML. Endogenous epitope tagging and fluorescence microscopy PLoS pathogens Medium 41662436
2026 Deletion of P. falciparum STOML causes a significant growth defect and slower asexual blood-stage development, while sexual-stage development remains unaffected, establishing a defined role in ABS parasite development. Genetic deletion (loss-of-function) with growth/development phenotypic readout PLoS pathogens Medium 41662436
2026 STOML resides in a large protein complex, and pulldown experiments identified the zinc-dependent metalloprotease FtsH as a likely interaction partner. The predicted AlphaFold2 structure of STOML shows high similarity with bacterial HflK/C, which forms a vault-like structure around bacterial FtsH hexamers, suggesting a similar STOML–FtsH complex in P. falciparum mitochondria. Pulldown/co-immunoprecipitation mass spectrometry; AlphaFold2 structural prediction PLoS pathogens Low 41662436
2026 Parasites lacking STOML were not more sensitive to respiratory chain-targeting drugs, rendering a function of STOML in respiratory chain assembly unlikely (negative finding). Drug sensitivity assay on STOML-knockout parasites PLoS pathogens Low 41662436
2018 The P. berghei stomatin-like protein (ortholog of PF3D7_0318100) localizes to the parasite mitochondrion along with the other SPFH family members (PHB1, PHB2, PHBL). Attempts to delete the stomatin-like protein from the P. berghei genome were unsuccessful, suggesting it is essential for asexual blood-stage development in the murine malaria model. Fluorescence microscopy for localization; attempted gene deletion (essentiality inference from failed deletion) Cell reports Low 29669282
2003 P. falciparum STOML (pfstom/PF3D7_0318100) protein is stage-specifically expressed in the trophozoite stage but not in the ring stage of erythrocytic development, and the recombinant C-terminal fragment was detected by Western blot. RT-PCR cloning, prokaryotic expression, Western blot with anti-recombinant-protein antibody Zhongguo yi xue ke xue yuan xue bao. Acta Academiae Medicinae Sinicae Low 12905716

Source papers

Stage 0 corpus · 3 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2018 An Unusual Prohibitin Regulates Malaria Parasite Mitochondrial Membrane Potential. Cell reports 28 29669282
2026 Plasmodium falciparum stomatin-like protein forms a putative complex with a metalloprotease in distinct mitochondrial loci. PLoS pathogens 1 41662436
2003 [Gene clone and its characteristics on band 7-like protein in Plasmodium falciparum FCC1/HN]. Zhongguo yi xue ke xue yuan xue bao. Acta Academiae Medicinae Sinicae 0 12905716