Affinage · Plasmodium

PF3D7_0317600

40S ribosomal protein S11, putative

Annotated
2026-09-07
4 papers in source corpus 3 papers cited in narrative 3 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_0317600 (S11) is a structural component of the small (40S) subunit of the P. falciparum cytoplasmic 80S ribosome, established by high-resolution cryo-EM structures of the parasite ribosome (PMID:24913268, PMID:26432834) and confirmed in its native, actively translating state by in situ cryo-electron tomography inside infected erythrocytes (PMID:40825879). Its placement within the 40S particle was defined structurally, and atomic models built by flexible fitting captured features distinguishing the P. falciparum ribosome from the mammalian ribosome (PMID:26432834). Beyond its assignment as a 40S component, no S11-specific functional, catalytic, or interaction experiments have been reported in the available corpus; the gene is characterized solely by membership in the small ribosomal subunit.

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2014 Medium

    Establishing the molecular architecture of the P. falciparum ribosome answered where S11 sits in the parasite translation machinery, placing it as a bona fide component of the 40S small subunit.

    Evidence Cryo-EM structure of the P. falciparum 80S ribosome at 3.2 Å in complex with emetine

    PMID:24913268

    Open questions at the time
    • Membership is inferred from the structural map; no functional experiment specific to S11 was performed
    • No S11-specific interactions or role in subunit assembly defined
  2. 2015 Medium

    Multiple independent reconstructions from blood-stage schizonts corroborated S11 as a stable structural constituent of the 40S subunit and refined parasite-specific features distinguishing it from the mammalian ribosome.

    Evidence Five cryo-EM reconstructions with atomic model building by flexible fitting of ribosomes purified from schizonts

    PMID:26432834

    Open questions at the time
    • Ribosome-level analysis from a single group; no direct interrogation of S11 function
    • No test of whether parasite-specific features involve S11 directly
  3. 2025 Medium

    Resolving the native ribosome inside infected erythrocytes confirmed that S11 is a component of the actively translating 40S subunit in its physiological cellular context, not merely in purified preparations.

    Evidence In situ cryo-electron tomography of P. falciparum-infected human erythrocytes yielding eight high-resolution translating-state structures

    PMID:40825879

    Open questions at the time
    • Single study; no experiment isolates S11's individual contribution to translation elongation
    • No functional or genetic assessment of S11 requirement in the parasite

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether S11 has any function beyond structural incorporation into the 40S subunit — including specific rRNA/protein contacts, a role in subunit assembly or translation fidelity, and essentiality in the parasite — remains uncharacterized.
  • No S11 knockout, knockdown, or rescue data
  • No S11-specific binding partners or contacts defined beyond ribosome membership
  • No evidence of any extraribosomal role

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
40S small ribosomal subunit of the P. falciparum cytoplasmic 80S ribosome

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2014 The cryo-EM structure of the P. falciparum 80S ribosome at 3.2 Å resolution revealed that PF3D7_0317600 (40S ribosomal protein S11) is a component of the small ribosomal subunit of the cytoplasmic ribosome. The structure was solved in complex with emetine, establishing the molecular architecture of the small subunit and placing S11 within the 40S particle. Cryo-EM structure determination at 3.2 Å resolution eLife Medium 24913268
2015 Multiple cryo-EM reconstructions of the P. falciparum 80S ribosome purified from blood-stage schizonts at sub-nanometer resolution confirmed that PF3D7_0317600 (S11) is part of the small subunit of the parasite's cytoplasmic ribosome, and atomic models built by flexible fitting captured structural features distinguishing the P. falciparum ribosome from mammalian ribosomes. Cryo-EM reconstructions (five structures) with atomic model building by flexible fitting Nucleic acids research Medium 26432834
2025 In situ cryo-electron tomography of P. falciparum-infected human erythrocytes produced eight high-resolution structures of the native malarial ribosome in actively translating states, confirming PF3D7_0317600 (S11) as a structural component of the small (40S) subunit within the native cellular environment and during active translation elongation. In situ cryo-electron tomography inside P. falciparum-infected erythrocytes; high-resolution structural determination Nature structural & molecular biology Medium 40825879

Source papers

Stage 0 corpus · 4 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine. eLife 272 24913268
2015 Dynamical features of the Plasmodium falciparum ribosome during translation. Nucleic acids research 45 26432834
2025 Integrated structural biology of the native malarial translation machinery and its inhibition by an antimalarial drug. Nature structural & molecular biology 7 40825879
2025 Antimalarial drug artemisinin stabilizes PfRACK1 binding to the ribosome. Structure (London, England : 1993) 3 40480224