Affinage · Plasmodium

PF3D7_0307200

60S ribosomal protein L7, putative

Annotated
2026-09-07
17 papers in source corpus 6 papers cited in narrative 6 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_0307200 (L7) is a structural component of the 60S large subunit of the Plasmodium falciparum cytoplasmic 80S ribosome, established through successive high-resolution cryo-EM structures of the parasite ribosome (PMID:24913268, PMID:26432834). It is resolved as an integral large-subunit protein in structures of the ribosome bound to translation-targeting antimalarials, including emetine (PMID:24913268) and (+)-mefloquine (PMID:28288098), and in eight in situ cryo-electron tomography reconstructions of the native, actively translating ribosome inside infected erythrocytes (PMID:40825879). Complexome and thermal-proteome profiling across the intraerythrocytic developmental cycle confirm L7's participation in the 80S ribosome and place it among 60S components exhibiting compositional heterogeneity across blood stages (PMID:37053161, PMID:41315737). Beyond its membership in the 60S large subunit of the P. falciparum ribosome, no experiment in the available corpus has established a specific enzymatic activity, direct binding partner, post-translational modification, or loss-of-function phenotype attributable to L7 itself.

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2014 Medium

    The first high-resolution view of the P. falciparum ribosome placed L7 within the 60S subunit, establishing where this protein sits in the cytoplasmic translation machine.

    Evidence Cryo-EM structure of the P. falciparum 80S ribosome bound to emetine at 3.2 Å

    PMID:24913268

    Open questions at the time
    • No functional experiment performed specifically on L7
    • No evidence for L7-specific binding partners beyond ribosomal context
    • No loss-of-function phenotype established
  2. 2015 Medium

    Resolving L7 in ribosomes purified from blood-stage schizonts confirmed its membership in the 60S subunit and situated it among structural features distinguishing the parasite ribosome from the mammalian ribosome.

    Evidence Sub-nanometer cryo-EM reconstructions with flexible-fitting atomic modeling of schizont-derived ribosomes

    PMID:26432834

    Open questions at the time
    • L7 role inferred only from complex membership
    • Parasite-specific features not localized to L7 specifically
    • No functional consequence of the structural differences tested for L7
  3. 2017 Medium

    A drug-bound structure kept L7 in the 60S subunit while guiding mutagenesis of ribosomal binding-site residues, framing the large subunit in the context of antimalarial mode of action.

    Evidence 3.2 Å cryo-EM of the ribosome bound to (+)-mefloquine with site-directed mutagenesis and structure-guided derivative design

    PMID:28288098

    Open questions at the time
    • Mutagenesis targeted the drug-binding site, not L7 itself
    • No direct role of L7 in drug binding or resistance established
  4. 2023 Low

    Analysis of ribosome heterogeneity across the life cycle raised the possibility that 60S components including L7 contribute to stage-specific ribosome specialization.

    Evidence Ribosome profiling and structural analysis reported in a review/analysis of ribosome heterogeneity

    PMID:37053161

    Open questions at the time
    • Abstract does not describe experiments specific to L7
    • Specialization is inferred, not demonstrated functionally for L7
    • No mechanism for stage-specific behavior established
  5. 2025 Medium

    In situ cryo-ET of native translating ribosomes and thermal-proteome complexome profiling confirmed L7 as a 60S component within actively elongating ribosomes and tracked its complex participation across blood-stage timepoints.

    Evidence Eight in situ cryo-ET structures in infected erythrocytes [#4] and MAP-X thermal proteome profiling across seven IDC timepoints [#5]

    PMID:40825879 PMID:41315737

    Open questions at the time
    • L7 established only as a large-subunit component of the translating ribosome
    • No L7-specific functional assay in the elongation cycle
    • Dynamic complex changes not resolved to L7-specific behavior

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether L7 has any function, interaction, modification, or phenotype beyond its structural membership in the 60S subunit remains unaddressed by the available corpus.
  • No L7-specific enzymatic activity or binding partner identified
  • No genetic loss-of-function or knockdown of L7
  • No post-translational modification characterized for L7

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
60S large ribosomal subunitP. falciparum 80S cytoplasmic ribosome

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2014 PF3D7_0307200 (L7), as a component of the P. falciparum 80S ribosome large subunit, was visualized at 3.2 Å resolution by cryo-EM in a structure of the P. falciparum 80S ribosome bound to emetine. The structure established the molecular architecture of the cytoplasmic ribosome, within which L7 resides as part of the 60S subunit. Cryo-EM structure determination at 3.2 Å resolution eLife Medium 24913268
2015 PF3D7_0307200 (L7), as part of the P. falciparum 60S large ribosomal subunit, was resolved in five cryo-EM reconstructions of ribosomes purified from P. falciparum blood-stage schizonts at sub-nanometer resolution, revealing structural and dynamic features that differentiate the P. falciparum ribosome from mammalian ribosomes. Cryo-EM reconstruction with flexible-fitting atomic model building; ribosome purification from blood-stage schizonts Nucleic acids research Medium 26432834
2017 PF3D7_0307200 (L7), as part of the P. falciparum 80S ribosome 60S subunit, was resolved in a 3.2 Å cryo-EM structure of the ribosome bound to (+)-mefloquine; the structure was used to guide mutagenesis of binding-site residues and design structure-based derivatives, placing the 60S large subunit in the context of mefloquine's mode of action. Cryo-EM structure at 3.2 Å; site-directed mutagenesis of ribosome-binding residues; structure-guided drug derivative design Nature microbiology Medium 28288098
2023 PF3D7_0307200 (L7) was identified as a component of the P. falciparum 60S ribosomal large subunit that exhibits heterogeneity and potential specialization across Plasmodium parasite life-cycle stages. Ribosome profiling and structural analysis described in a review/analysis of ribosome heterogeneity PLoS pathogens Low 37053161
2025 PF3D7_0307200 (L7), as a 60S large-subunit component of the P. falciparum 80S ribosome, was visualized in eight high-resolution in situ cryo-electron tomography structures of the native malarial ribosome in actively translating states inside P. falciparum-infected human erythrocytes, revealing new molecular details of the translation elongation cycle and showing that a Plasmodium-specific translation inhibitor decreases elongation factor-bound ribosomal states. In situ cryo-electron tomography of P. falciparum-infected erythrocytes; eight high-resolution structures determined Nature structural & molecular biology Medium 40825879
2025 PF3D7_0307200 (L7), as a component of the P. falciparum 80S ribosome, was detected in meltome-assisted profiling of protein complexes (MAP-X) across seven timepoints of the P. falciparum intraerythrocytic developmental cycle, confirming its participation in the 80S ribosome complex and revealing dynamic alterations in complex composition across blood stages. Thermal proteome profiling (MAP-X) in intact P. falciparum cells across IDC timepoints Nature microbiology Low 41315737

Source papers

Stage 0 corpus · 17 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine. eLife 272 24913268
2017 Mefloquine targets the Plasmodium falciparum 80S ribosome to inhibit protein synthesis. Nature microbiology 136 28288098
2018 The mitochondrial ribosomal protein L13 is critical for the structural and functional integrity of the mitochondrion in Plasmodium falciparum. The Journal of biological chemistry 53 29626096
2015 Dynamical features of the Plasmodium falciparum ribosome during translation. Nucleic acids research 45 26432834
2020 Genetic ablation of the mitoribosome in the malaria parasite Plasmodium falciparum sensitizes it to antimalarials that target mitochondrial functions. The Journal of biological chemistry 27 32273345
2020 Plasmodium falciparum translational machinery condones polyadenosine repeats. eLife 21 32469313
2017 malERA: An updated research agenda for basic science and enabling technologies in malaria elimination and eradication. PLoS medicine 21 29190277
2023 Ribosome heterogeneity and specialization of Plasmodium parasites. PLoS pathogens 13 37053161
2019 Adaptation of Translational Machinery in Malaria Parasites to Accommodate Translation of Poly-Adenosine Stretches Throughout Its Life Cycle. Frontiers in microbiology 11 31866984
2025 Integrated structural biology of the native malarial translation machinery and its inhibition by an antimalarial drug. Nature structural & molecular biology 7 40825879
2016 Receptor for Activated C-Kinase 1 (PfRACK1) is required for Plasmodium falciparum intra-erythrocytic proliferation. Molecular and biochemical parasitology 7 27732881
2021 Structural analysis of the SRP Alu domain from Plasmodium falciparum reveals a non-canonical open conformation. Communications biology 6 34017052
2025 Antimalarial drug artemisinin stabilizes PfRACK1 binding to the ribosome. Structure (London, England : 1993) 3 40480224
2022 Association of the receptor for activated C-kinase 1 with ribosomes in Plasmodium falciparum. The Journal of biological chemistry 3 35452681
2025 MAP-X reveals distinct protein complex dynamics across Plasmodium falciparum blood stages. Nature microbiology 2 41315737
2026 Targeting protein-protein interactions in Plasmodium: from asexual replication to sexual development. Parasites & vectors 0 42001110
2017 Parasite physiology: No longer lost in translation. Nature microbiology 0 28540920